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Cold adaptive traits revealed by comparative genomic analysis of the eurypsychrophile Rhodococcus sp. JG3 isolated from high elevation McMurdo Dry Valley permafrost, Antarctica
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Leo Baumgart
… team responsible for piloting and operationalizing new genomic technologies, integrating automated liquid … Player-Jackson et al. "Supporting FAIR Scientific Workflows with the JGI Analysis Workflow Service (JAWS)." In 2025 IEEE … Jangir Selimkhanov, Leo Baumgart, Susan E. Cohen, Susan S. Golden, Natalie A. Cookson, and Jeff Hasty. "A microfluidic …
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Simon Roux
… tools to identify virus sequences, the design of new experimental approaches to link viruses to their host(s), collaboration with JGI users for analyzing viral datasets, and the … cycle in wild populations of green sulfur bacteria with long standing virus-host interactions. The ISME Journal …
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Frederik Schulz
… the DOE Joint Genome Institute in 2016 and is leading the New Lineages of Life Group. His research is focussed on the … A. et al. 2023. Identification of mobile genetic elements with geNomad. Nature Biotechnology . Schulz et al. 2022. … Selected Publications …
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2022 Progress Report
… of the JGI is to provide the global research community with access to the most advanced integrative genome science …
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Four Researchers Join JGI User Executive Committee
… are regular participants of the JGI annual user meeting and New Lineages of Life symposia. Bik is a recipient of the Community Science Program (CSP) New Investigator call. Through membership in the UEC, Bik … He studies fungal biodiversity, ecology, and evolution, with a focus on microbiome sciences and fungal symbioses. He …
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From Stress to Growth: The adaptive mechanisms of algae in changing Arctic waters
… more than 30% in terms of quantity and thickness. Replacing older, thicker ice with younger, thinner ice means more fresh water — and less … the adaptive mechanisms of Arctic microalgae but also opens new avenues for utilizing these organisms in sustainable …
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Katherine Louie
… over 10k samples/year, Dr. Louie and her team work with other JGI scientists in development of new, advanced mass spectrometry research products such as … DNA-SIP for helping identify active micro-organisms within complex communities, and custom software for … Selected Publications …
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The Expanding Universe of Methane Metabolisms in Archaea
… Metagenome-assembled archaeal genomes provide new insights into an ancient metabolism. Methane is a … “There is evidence that methanogenesis is one of the oldest metabolisms, with the first traces possibly at ~3.5 Gy (billion years),” …
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Forming Scientific Connections and Building Community
… workshops, data carpentry hackathons, and also made new friends while working on their summer projects. Watch … had to say about their experiences and what they’ll take with them as they go forward in their careers.   Listed … Kirton Project: “ Streamlining computational studies of misfolding proteins via high performance computing ” Erika …
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Here, There and Everywhere: Large and Giant Viruses Abound Globally
… of 100 times the size of what has typically been associated with viruses, while the genomes of large viruses may be only … proteins, and virus diversity in this group expanded 10-fold from just 205 genomes, redefining the phylogenetic tree … environmental conditions. Function prediction on the 2,000 new giant virus genomes led the team to uncover a prevalence …
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RECAP: Keynote Speakers Talk Innovation at 2022 JGI Annual Meeting
… our  2022 Annual Meeting . The meeting was a hybrid event, with guests joining onsite at the Integrative Genomics … ways that her team is looking to use CRISPR-Cas9 to solve new problems. According to Doudna, the CRISPR-Cas9 … little individual variabilities within a species that hold clues for maximizing the genetic code’s potential. And …
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