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Metagenomes and Metagenome-Assembled Genomes from Microbiomes Metabolizing Thin Stillage from an Ethanol Biorefinery
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Fishing for Novel Cellulose Degraders
Science One of the most vital pieces of equipment for fly fishing is a boxful of lures. Designed with feathers or wires … uncultivated and unknown. The challenge remains to learn more about what microbes are present in any given … be further developed to bait for specific functions other than cellulose-degradation to tease out uncultivated …
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Dealing with Drought: Uncovering Sorghum’s Secrets
… earth are becoming common images in many regions due to more extreme weather events such as heat waves, droughts and … for agricultural products.  Sorghum bicolor (L.) Moench is an African grass that adroitly handles droughts, floods … plants flower. More genes responded to drought in the roots than in the leaves, suggesting that roots are more affected …
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Bayesian Analysis of Congruence of Core Genes in Prochlorococcus and Synechococcus and Implications on Horizontal Gene Transfer
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The Case for Conservation
How sex chromosomes “older than dinosaurs” could help improve crop yields.  The Science The fire moss Ceratodon purpureus is a short plant with a complex genome . Now, high-quality … be completed faster without extra crosses. The work wraps more than a decade of working with researchers at the U.S. …
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Combining Promiscuous Acyl-CoA Oxidase and Enoyl-CoA Carboxylase/Reductases for Atypical Polyketide Extender Unit Biosynthesis
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How to Target a Microbial Needle within a Community Haystack
… cells from communities of uncultivated microbes, and then efficiently retrieve and characterize their genomes. The … cycles remains unexplored and uncultivated. Developing a more targeted genomic approach would allow researchers to … microbes of interest. When the microbe of interest is a tiny fraction of that complex community, the search for …
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Understanding Wildfire Recovery, Starting in Soil
… genes with functions useful for forest recovery, this study sheds light on how microbes contribute as a forest … of plants and animals, but with climate change driving more extreme wildfires, more and more forests are under … this program, researchers leverage the capabilities of more than one DOE Office of Science National User Facilities in a …
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Gut Fungi: Unexpected Source of Novel Chemicals
Fungi from herbivore poop make surprisingly complex compounds — an energetically expensive feat … plant biomass, which could inform how scientists can more easily convert plants into carbon-neutral biofuels . … easily integrate the expertise and capabilities of more than one DOE Office of Science National User Facilities , …
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Toasting to the 2020 JGI-UC Merced Summer Internship Program
… was preceded by short final presentations attended by more than 75 JGI staff. According to Axel Visel and Zhong Wang, founders of this internship program, …
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JGI User Executive Committee Expands
National Laboratory, Rebecca Smith of the University of Wisconsin, Maggie Sogin of the University of California, … in finding ways to boost visibility of the CSP to encourage more plant proposals and provide feedback on pangenome tool … His lab is interested in how microbial communities can efficiently degrade complex polymers that are not easy to …
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iPHoP: A Matchmaker for Phages and their Hosts
… humans. With metagenomic sequencing, researchers have found more of these viruses than ever before, in all kinds of ecosystems. However, … matching these viral genetic sequences to their hosts is crucial to understanding what these viruses can do. …
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