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Trent Northen
… is currently a Senior Staff Scientist at Berkeley Lab. Since joining Berkeley Lab in 2008, Dr. Northen has had leadership … to learn more about the program's areas of focus, major initiatives and more.  … B.S. in Chemical Engineering, University of California Santa …
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Soil virus offers insight into maintaining microorganisms
… Using the IMG/M data portal, researchers have identified a virus protein tied to carbon cycling.  The Science Through a … and cycled in soils. Ultimately, changes in  soil carbon content can influence atmospheric carbon dioxide … the FICUS program to JEM and used resources at the DOE Joint Genome Institute (JGI) and the Environmental Molecular …
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Biotech Partners Summer Intern Co-Authors NAR Paper
… Kaushal Sharma, one of five Antioch High School rising juniors who participated in internships at the DOE Joint Genome Institute this summer … program is now an author on a Nucleic Acids Research publication. The paper describes the version 6 data updates …
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Matthew Kellom
… Matt is broadly interested in the interactions between microbial life and environment, and using metagenomics to study these complex natural systems. Microbial communities living in …
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The deuterostome context of chordate origins
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JGI Earth Month: Healthy Streams, Nutritious Microbes?
… In April 2020, we mark both the 50th celebration of Earth … Earth and DNA are close to our JGI hearts, we’re highlighting genomic science research that feels especially relevant … what macromolecules are in their biomass, because that affects the quality of the food of these invertebrates that …
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Three Join the JGI User Executive Committee
… of the University of California, Santa Barbara. They join eight other JGI users already serving on the UEC – go here to view the full roster of members. … early career researchers and new users, advise on data release and sharing policies, and help develop programs to …
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Picking Up Threads of Cotton Genomics
… Analysis reveals cotton genome stability across global lineages . Come harvest time, the cotton fields look like … to other plant genomes. “Globally, cotton is the premier natural fiber crop of the world, a major oilseed crop, and … Science “The results described in this  Nature Genetics publication will facilitate deeper understanding of cotton …
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JGI Part of Berkeley Lab Team Awarded Best Use of HPC in Life Sciences
… Multiple 2021 HPCwire Awards ” on the Berkeley Lab Computing Sciences site. Lawrence Berkeley National Laboratory … Lab), the National Energy Research Scientific Computing Center (NERSC), the DOE Joint Genome Institute (JGI), … DOE Exascale Computing Project. The award recognized the release of MetaHipMer, an end-to-end genome assembler that …
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Preferential retention of genes from one parental genome after polyploidy illustrates the nature and scope of the genomic conflicts induced by hybridization
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Single Nucleotide Polymorphism Charting of P. patens Reveals Accumulation of Somatic Mutations During in vitro Culture on the Scale of Natural Variation by Selfing
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Boosting Small Molecule Production in Super “Soup”
… Do metabolic pathways from engineered yeasts still work in cell-free environments? (Spoiler: Yes.) Think of cells as … yeast strains engineered by Alper’s team to convert the sugar glucose to the products including ethanol and … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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