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Olpidium, The Key to the Origin of Terrestrial Fungi
Before 2006, Olpidium was one of the many obscure fungi of Chytridiomycota (the “chytrids”).  A … Igor Grigoriev from the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … attracted the attention of many mycologists with the two publications of the kingdom-wide, multi-gene phylogeny of …
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Plotting a Model for Virus-Host Warfare Deep Below Ground
…   Visualizing a novel, candidate viral genome found in the deep subsurface … Science Altiarchaea are carbon-fixing microbes and targets of multiple viruses in Earth’s deep subsurface. They are … oxygen deep below ground. These archaea fix carbon and nitrogen, but the viruses that infect Altiarchaea cause the …
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New Research Finds Flagella in the Terrestrial Roots of Marine Bacteria
Ancient  Chloroflexota s ditched their flagella and other traits when migrating back to the ocean. The Science Scientists have … show the ability to respire with or without oxygen, fix nitrogen, and break down organic and inorganic compounds. …
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Yasuo Yoshikuni
… has been head of the DNA Synthesis Science Program since 2015. The mission of this program is to harness the … 2022 DeMirci et al. Intersubunit Coupling Enables Fast CO2-Fixation by Reductive Carboxylases., ACS Central Science , … … DNA Synthesis Science Program … Education … Selected Publications … Awards and Honors …
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JGI@25: Using Team Science to Build Communities Around Data
In honor of the JGI's 25th anniversary in 2022, we have revisited a … genomes that are both large and complex. The first publication of a genome generated by the OGG initiative — …
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Plant Program
… collaborative user projects, the JGI’s Plant Program delves into the natural world’s potential to address global … the vulnerabilities of monocultures and the benefits of nitrogen-fixing nodules in legumes, which can reduce … the ability to discover syntenic orthologs, generate publication quality graphics and explore pangenome views of …
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Rex Malmstrom
… and leader of the Microscale Applications group. Before joining the JGI in 2010, he made the first ever measurements … D. et al. 2016. SAR11 bacteria linked to ocean anoxia and nitrogen loss. Nature 536 (7615), 179 Hatzenpichler, R. et … dissertation in life sciences 2006 … Education … Selected Publications … Awards and Honors …
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Natural Prodcast Episode 7: Ben Shen
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about …
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NeLLi — Symposium on New Lineages of Life
The DOE Joint Genome Institute hosted the hybrid “NeLLi 2023 Symposium” delving into the most recent expansions of the Tree of Life and latest discoveries toward the …
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Climate Change Threatens Base of Polar Oceans’ Bountiful Food Webs
… warm-adapted microbes edge polewards, they’d oust resident tiny algae. The cold polar oceans give rise to some of the largest food webs on Earth. And at their base are …
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The More the Merrier: Making the Case for Plant Pan-genomes
… system traces polyploid genome evolution. Flowering plants abide by the concept, “the more the merrier,” with … plants; at least once during their evolution, the genomes of flowering plants multiply. Over time, plants lose many …
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Learning to Look
Machine learning approach significantly expands inovirus diversity. To … “Where’s Waldo?” readers need to look for a number of distinguishing features. Several characters may be …
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