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2023 Progress Report
Mission  As a U.S. Department of Energy Office of Science user facility, we provide advanced genomic capabilities, large-scale data, and professional expertise to support the … complex biological and environmental systems. We optimize our service to the community through responsibly managing …
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The Surprising Structure of a Shrub Willow Sex Chromosome
… of mammals is, for the first time, seen in a plant. The Science Sex in plants can be befuddling. Most species are … with sufficient resolution to analyze their structure. Scientists found both a gene likely important for sex … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Sequencing and functional validation of the JGI Brachypodium distachyon T‐DNA collection
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Building Sphagnum Genomic Resources
… insights on their potential carbon cycling impact.   The Science Enabled by the JGI’s Community Science Program (CSP), researchers are developing a number of resources to build up Sphagnum as a plant model system focused …
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Inference and reconstruction of the heimdallarchaeial ancestry of eukaryotes
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Obtaining Comparative Genomic Data with the VISTA Family of Computational Tools
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Recruiting Human Microbiome Shotgun Data to Site-Specific Reference Genomes
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The future of legume genetic data resources: Challenges, opportunities, and priorities
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Next generation sequencing data of a defined microbial mock community
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A phylum-level phylogenetic classification of zygomycete fungi based on genome-scale data
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A k-mer-based approach for phylogenetic classification of taxa in environmental genomic data.
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Effects of Polar Light Cycle on Microbial Food Web
… lake microbial communities change with the seasons. The Science Light-harvesting bacteria (phototrophs) in … dominates these polar environments greatly contributes to our larger understanding of carbon and other nutrient cycles … Ace Lake were collected over a 10-year period and sent to JGI for metagenomic sequencing. A study  recently published …
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