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JGI-UC Merced Interns Share Their 2021 Experiences
… from UC Merced spent eight weeks working virtually with JGI mentors to investigate rigorous research projects, hone science presentation skills, and participate in professional … of Binning Tools for Microbial Eukaryotes in Metagenomes … Functional exploration of Phage Impact on Microbial Root … …
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Learning to Look
July 22, 2019, in  Nature Microbiology , a team led by scientists at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, developed an algorithm that a … result of this hidden diversity of inoviruses now overhauls our perception of this virus group – from minor curiosities …
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Accelerating Metagenomics Discoveries with Deep Learning
On July 6, scientists from Lawrence Berkeley National Laboratory … recognition: for example, a camera’s ability to recognize your face and distinguish it from your friend’s. Biologists … of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence Berkeley National …
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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
… of meta-analyses boosted by AI and Machine Learning — JGI researchers and collaborators work to create FAIR … process. The isotope labeling incubations can take hours to months, followed by weeks of tricky, laborious lab … Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National …
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Jeremy Schmutz
For the past 13 years, Mr. Schmutz has directed the JGI Plant Program, focusing on the organization of community driven science for JGI Plant Flagship Genomes and DOE relevant … 2023. JGI plant gene atlas: an updateable transcriptome resource to improve functional gene descriptions across the …
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Supercharging SIP in the Fungal Hyphosphere
… helps ID novel interactions between bacteria and fungi The Science Researchers have successfully automated aspects of a … is a long and laborious process — as well as a key way scientists study microorganisms. Because microorganisms live … HT-SIP is a capability available to request through  the JGI proposal calls . … Work at Lawrence Livermore National …
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Fungal Friends or Foes in Plant Roots
… and fungi that can help or harm plant host health. The Science Researchers compared the genomes of fungi that … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … roots: friends, enemies or frenemies? … Datasets … From our partners … Behind the Paper …
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Fields of Breeders’ Dreams: A Team Effort Toward Targeted Crop Improvements
… propagated from cuttings represent a diverse collection sourced from half of the United States. As  reported January … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National …
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Integrative genomic mining for enzyme function to enable engineering of a non-natural biosynthetic pathway
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Chemical synthesis rewriting of a bacterial genome to achieve design flexibility and biological functionality
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Functional and genomic diversity of methylotrophic Rhodocyclaceae: description of Methyloversatilis discipulorum sp. nov.
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The contributions from the progenitor genomes of the mesopolyploid Brassiceae are evolutionarily distinct but functionally compatible
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