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Pinning Down a Piece of Photosynthesis
Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … National Laboratory’s National Synchrotron Light Source II, and SLAC National Accelerator Laboratory’s … in complementary ways to investigate this protein domain. Scientists at Brookhaven National Laboratory’s NSLS-II used …
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High-quality draft genome sequence of Pseudomonas aeruginosa san ai, an environmental isolate resistant to heavy metals
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Viral niche-partitioning: Comparative genomics of giant viruses across environmental gradients in a High Arctic freshwater-saltwater lake
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2023 Progress Report
Mission  As a U.S. Department of Energy Office of Science user facility, we provide advanced genomic … research community in studies of complex biological and environmental systems. We optimize our service to the community through responsibly managing …
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Environmentally responsive QTL controlling surface wax load in switchgrass
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Sequence to Function: Applications and Analysis for the Future (SFA²F)
… (SFA²F) meeting brings together established and emerging scientists from academia, industry, and government … talk and a tech talk. Stop by the JGI booth to learn about our user programs and how we can help advance your science. …
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A Collaboration to Improve Plant Genome Annotations Across Species
JGI Plant Gene Atlas is a huge updateable transcriptome resource spanning diverse plant species. It was developed to … *The HudsonAlpha Genome Sequencing Center works with scientists at the JGI a lot. In fact, HudsonAlpha Faculty … one of which is sweet sorghum Rio from a JGI Community Science Program project and another is Lupinus albus from a …
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A Better Way to Find RNA Virus Needles in the Proverbial Database Haystacks
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … system. “We then looked into many more samples and refined our methodology,” Neri said. “Our team grew and so did the …
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Matt Blow
Dr. Blow joined the JGI in 2009, and currently heads the User Support Analysis … resequencing, transcriptome, epigenome and other functional genomics datasets generated by JGI user science projects. … BS in Biochemistry and Biological …
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An Automated Tool for Assessing Virus Data Quality
… assess virus sequence fragments and data quality. The Science Through advances in sequencing technologies and … virus sequences are being recovered and identified from environmental samples (metagenomes). However, the quality … uncultivated viruses. Following up on those guidelines, JGI researchers have now developed CheckV (pronounced …
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Novel metabolic interactions and environmental conditions mediate the boreal peatmoss-cyanobacteria mutualism
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Rapid changes in coastal ocean microbiomes uncoupled with shifts in environmental variables
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