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Partnerships: Myco-Ed
… DNA is extracted from samples, which is then sent to the JGI for genome sequencing, assembly and annotation. … and distribution of fungal genome datasets. It includes JGI-sequenced and publicly available datasets encompassing a …
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Cataloging the Microbes that Manage the Health of River Systems
… systems, these communities remain understudied. Through the JGI’s Community Science Program, Colorado State University … program at Pacific Northwest National Laboratory. The JGI sequenced over 1,000 metagenomes and established … and metatranscriptomic sequencing was performed at the JGI under a Community Science Program and the University of …
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Matt Blow
… Dr. Blow joined the JGI in 2009, and currently heads the Genome Analysis group. … RNA editing and cancer genetics. Dr. Blow carried out postdoctoral work at LBNL, where he worked on computational … in human and other vertebrate genomes. When he joined the JGI, he worked as a project scientist and then as a research …
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Here, There and Everywhere: Large and Giant Viruses Abound Globally
… JGI-led team significantly expands the global diversity of … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … hosts,” noted study senior author  Tanja Woyke , who heads JGI’s  Microbial Program . The team mined more than 8,500 …
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Eelgrass Proves to Be Much Younger Than We Thought
… from the China Scholarship Council to L.Y. (number 201704910807), by a fellowship to M.K. in the Helmholtz …
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Celebrating a Decade of Science through the JGI-UC Merced Genomics Internship Program
… internship program between the DOE Joint Genome Institute (JGI) and University of California (UC), Merced. What started … and ambitions. He reminisced over the impact of a meeting he had with former JGI Director Eddy Rubin. “That one meeting honestly kind of changed a lot of things because I …
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The fungus that made itself at home
… from Europe, that was sequenced and analyzed by the JGI. The researchers found that S. lacrymans var. lacrymans …
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A Model System for Perennial Grasses
… including researchers at the DOE Joint Genome Institute (JGI), a DOE Office of Science User Facility, report the … the candidate bioenergy crop, switchgrass. Through the JGI’s Community Science Program , JGI sequenced and assembled near-complete genomes of P. …
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Improving the Cacao Genome and Phytozome
… Cocoa Organization (ICCO), global cocoa bean production in 2017-2018  was 4.6 million metric tons . The global … for comparative purposes on the latest version of the JGI plant portal Phytozome at  phytozome-next.JGI.doe.gov . One of the goals in updating the genome …
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Cold adaptive traits revealed by comparative genomic analysis of the eurypsychrophile Rhodococcus sp. JG3 isolated from high elevation McMurdo Dry Valley permafrost, Antarctica
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Bacteria and Fungi Divvy Up the Work in Forest Floor
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … Berkeley National Laboratory, to create the database. JGI provided metagenome and metatranscriptome sequences, as … an energy source. No fungi are known to be able to do this. JGI and EMSL’s contributions were enabled by the Facilities …
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Building Sphagnum Genomic Resources
… carbon cycling impact.   The Science Enabled by the JGI’s Community Science Program (CSP), researchers are … draft genome for  S. fallax is already available on the  JGI plant portal Phytozome , and the S. magellanicum genome … P23117-B17, P25111-B22, P26392-B20, and I1628-B22), the JGI (CSP 605), the German Research Foundation (DFG, PE …
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