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A More Intuitive Phytozome Interface
… Highlighting the latest interactive version of the JGI’s plant data portal. On August 6, 2021,  version 12 of … August 6th? All URLs with a domain of  https://phytozome.jgi.doe.gov will be forwarded ( where possible ) to their corresponding pages at  https://phytozome-next.jgi.doe.gov . If a genome from v12 is present in v13, the …
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Game On: High School Students Drive Everglades Metagenomics Study
… In late June, Kathleen Lail, a member of JGI’s Sample Management Group, attended a conference in Florida to discuss a JGI pilot project involving soil sampling in the Florida … U.S. Department of Energy (DOE) Joint Genome Institute (JGI) , a DOE Office of Science User Facility. She took …
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2022 Progress Report
… (IGB) seen above is home to the DOE Joint Genome Institute (JGI). Researchers from the DOE Systems Biology Knowledgebase … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user facility at Lawrence … and environmental challenges.   Mission  The mission of the JGI is to provide the global research community with access …
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MGM Workshop at Fisabio Summer School 2025
… lectures and seminars as well as practical hands-on sessions in bioinformatics and biostatistics Several sessions will be devoted to training in the use of the …
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Disclaimer
… statement of authorship are reproduced on all copies. The JGI is not responsible for the contents of any off-site …
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MGM Workshop at Fisabio Summer School 2026
… lectures and seminars as well as practical hands-on sessions in bioinformatics and biostatistics. Several sessions will be devoted to training in the use of the …
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Partnerships: Myco-Ed
… DNA is extracted from samples, which is then sent to the JGI for genome sequencing, assembly and annotation. … and distribution of fungal genome datasets. It includes JGI-sequenced and publicly available datasets encompassing a …
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Exploring Possibilities: 2022 JGI-UC Merced Interns
… Hear more about what they learned from working with their JGI mentors, what challenges they overcame, and what new … school.  The interns from this cohort and their respective JGI mentors are: Ruoxi Zhao and mentor Margot Bezrutczyk … Um, during the internship I was able to have code review sessions with a few people in my team, and we can sit down …
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Matt Blow
… Dr. Blow joined the JGI in 2009, and currently heads the Genome Analysis group. … RNA editing and cancer genetics. Dr. Blow carried out postdoctoral work at LBNL, where he worked on computational … in human and other vertebrate genomes. When he joined the JGI, he worked as a project scientist and then as a research …
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Improving the Cacao Genome and Phytozome
… Cocoa Organization (ICCO), global cocoa bean production in 2017-2018  was 4.6 million metric tons . The global … for comparative purposes on the latest version of the JGI plant portal Phytozome at  phytozome-next.JGI.doe.gov . One of the goals in updating the genome …
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Cold adaptive traits revealed by comparative genomic analysis of the eurypsychrophile Rhodococcus sp. JG3 isolated from high elevation McMurdo Dry Valley permafrost, Antarctica
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Bacteria and Fungi Divvy Up the Work in Forest Floor
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … Berkeley National Laboratory, to create the database. JGI provided metagenome and metatranscriptome sequences, as … an energy source. No fungi are known to be able to do this. JGI and EMSL’s contributions were enabled by the Facilities …
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