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Defining a Pan-Genome for Antarctic Archaea
… in Antarctic lakes, some of which have salinities 10 times that of seawater. To shed light on the global … of Halorubrum lacusprofundi from Deep Lake and Rauer 1 Lake, one of the lakes in the nearby Rauer Islands. … the US Department of Energy under contract no. DE-AC02-05CH11231. S.E. was supported by the EMBO Long-Term Fellowship …
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Building Sphagnum Genomic Resources
… U.S. Department of Energy under Contract No. DE-AC02-05CH11231. For the sphagnome project, germplasm establishment and …
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Understanding Wildfire Recovery, Starting in Soil
… This work was supported through a USDA NIFA award (2021-67019-34608) to M.J.W. FTICR-MS analyses were performed under … the US Department of Energy under Contract No. DE-AC02-05CH11231. …
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JGI at the AGU Fall Meeting
… (all times in PST unless otherwise noted): December 7   9:15am PT (online) Town Hall on the role of user facilities in … User Facilities in One Proposal via FICUS December 13 8:12 am Convention Center eLightning Theater IV: Kuno Kasak, … the snowmelt period in mountainous watersheds” December 15 12:51pm Joan Damerow, Berkeley Lab (short talk): “How do we …
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Mindfully Moving JGI
… to the heart of the Berkeley Lab campus. By Friday, October 18, the production sequencing labs in Building 100 were silent. Twenty years after the JGI united the … after countless generations of sequencing platforms (up to 120 sequencing machines at maximum) maintained by a …
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Engagement Webinar: Utilizing long-read sequencing for metagenomics and DNA modification detection
… for PacBio? A(nswer):  Regular PacBio typically requires ~ 1.5-10 ㎍. Low-input protocols are continuously improved, but currently require input in the ~ 30 – 100ng range. Note that beyond quantity, input quality (i.e., …
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DAS Tool for Genome Reconstruction from Metagenomes
… of the Emerging Technologies Opportunity Program in 2013, a team of researchers has been working on improving … (CAMI) Challenge, a competition launched in 2015 by a community initiative, with varying numbers of … U.S. Department of Energy under Contract No. DE-AC02-05CH11231. Support was provided by the DOE and the National …
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Model Fern Reveals Insight into DNA Thievery in Ferns
… an array of defense mechanisms. The Impact There are over 10,400 species of ferns alive today. Boasting adaptations in … Lab) took on the Open Green Genome Initiative in 2018 as part of its Community Science Program. The OGG has set … of Energy operated under Contract No. DE-AC02-05CH11231.This work was supported by US National Science …
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The Surprising Structure of a Shrub Willow Sex Chromosome
… by the NSF Dimensions of Biodiversity Program (DEB-1542509 to S.D., DEB-1542486 to LBS, and DEB-1542599 to … Natural Science Foundation of China (31590821, 31561123001, 31500502, 41871044), National Key Research and Development Program of China (2017YFC0505203, 2016YFD0600101), and the National Key Project for Basic Research …
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Cultivating Symbiotic Antarctic Microbes
… to that of a free-living organism. First discovered in 2011, Nanohaloarchaea are part of the DPANN (Diapherotrites, … outlined by JGI scientists and their collaborators in 2013. While most DPANN lineages are predicted symbionts, the … the US Department of Energy under contract no. DE-AC02-05CH11231. S.E. was supported by the EMBO Long-Term Fellowship …
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Extracting the Secrets of Secondary Metabolites
… in overcoming this obstacle when it hit the scene in 2019. Now, that power is poised to grow exponentially by … User Facility, is supported under contract DE-AC02- 05CH11231. …
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A Grass Model to Help Improve Giant Miscanthus
… and Environmental Research under Award Number DE-SC0018420. The work conducted by the U.S. Department of Energy … U.S. Department of Energy under Contract No. DE-AC02-05CH11231. The collection of the M. sinensis and M. … and Environmental Research (BER), grant nos. DE-SC0006634 and DE- SC0012379. The generation of the tetraploid M. …
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