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Boosting Small Molecule Production in Super “Soup”
Do metabolic pathways from engineered yeasts still work in cell-free environments? (Spoiler: Yes.) Think of cells as … processes running smoothly. As reported August 26, 2021, in Nature Communications , researchers led by Hal Alper at The …
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Engagement Webinar: What Can You Do With An Approved CSP Functional Genomics Call Proposal?
DNA Synthesis Science group held a  JGI Engagement: Accessing Functional Genomics Capabilities Webinar inviting researchers to submit white papers to the … of the proposals. Upon approval from JGI reviewers, the DOE project managers review the proposals. The proposer of …
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Marine Microbe Contains Multitudes
A deep dive into microbial genomics reveals one bacterial species is made of four ecologically distinct groups with different lifestyles. The Science The … out that, without the JGI, the discoveries made in this project wouldn’t have been possible. Scientists hadn’t known …
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JGI at the AGU Fall Meeting
This year the AGU Fall Meeting, with the theme “Science is Society,” hosts sessions in … poster B45O-1813  : Maggie Bowman, PNNL: “EMSL’s 1000 Soils Project: core collection strategy and data types available” … 8:03am Convention Center eLightning Theater III: Pamela Weisenhorn, KBase at Argonne (lightning talk): “Applying Data …
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Uncovering Novel Genomes from Earth’s Microbiomes
… for multiple applications.       Despite advances in sequencing technologies and computational methods in the … (Berkeley Lab), and the  DOE Systems Biology Knowledgebase (KBase) . Metagenomics is the study of the microbial … hope JGI and other institutions continue to do this kind of projects.” The work also used resources of the  National …
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Ben Bowen
Specializing in mass spectrometry-centered projects, Dr. Bowen’s work … niche partitioning among sympatric soil bacteria. Nature communications, 6(1), 8289. Yao, Y., Sun, T., Wang, …
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Here, There and Everywhere: Large and Giant Viruses Abound Globally
… diversity of large and giant viruses. While the microbes in a single drop of water could outnumber a small city’s … and giant. In a recent study  published in the journal  Nature , a team led by researchers at the U.S. Department of …
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Learning to Look
Machine learning approach significantly expands inovirus diversity. To answer the question, “Where’s Waldo?” … have all of these features. As described July 22, 2019, in  Nature Microbiology , a team led by scientists at the U.S. …
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Climate Change Threatens Base of Polar Oceans’ Bountiful Food Webs
… warm-adapted microbes edge polewards, they’d oust resident tiny algae. The cold polar oceans give rise to some of the … their base are microscopic, photosynthetic algae. But human-induced climate change , a new study suggests, is displacing … according to a new study published September 16, 2021 in Nature Communications , warmer waters and communities …
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Bacteria and Fungi Divvy Up the Work in Forest Floor
… second fiddle to those from fungi when it comes to breaking down tough plant fibers. The Science Walk in a temperate forest filled with Norway spruce trees, and … sequences assembled as part of its 1000 Fungal Genomes Project . To map microbial activity, Baldrian’s team …
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JGI Earth Month: The Unusual Metabolism That Helps Plants Withstand Drought
In April 2020, we mark both the 50th celebration of Earth … Earth and DNA are close to our JGI hearts, we’re highlighting genomic science research that feels especially relevant … i.e. in January. She talked about her  Community Science Project proposal with JGI, in which she’s studying a special …
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Celebrating a Decade of Science through the JGI-UC Merced Genomics Internship Program
… 2023 marked a decade since the inception of the flagship internship program between the DOE … partnership had become a “model” of sorts at the Lab. “This project represents part of our long term efforts to …
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