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Effects of Polar Light Cycle on Microbial Food Web
Populations of Antarctic lake microbial communities change with … Ace Lake were collected over a 10-year period and sent to JGI for metagenomic sequencing. A study  recently published … water up top and anoxic water below. Cavicchioli and his team took samples from all three sections of the stratified …
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Making a Lichen Together
For the first time, a team analyzes the transcriptomes of a lichen fungus and alga … Science The humble lichen is a superorganism: one being that is actually comprised of two (or more) participants. One … the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility. Grigoriev and …
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Fishing for Novel Cellulose Degraders
… for fly fishing is a boxful of lures. Designed with feathers or wires to mimic an insect or a particular movement, … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab). Using a single-cell screen, they can now identify microbes …
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Scientific Advisory Committee
Advisory Committee (SAC) is a board convened by the JGI Director to provide a scientific and technical overview … guidance, and counsel on the effective management and strategic objectives of the JGI. The SAC serves as the … programs at the JGI; and overview of the Community Science Program (CSP). A crucial job of the committee is to …
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BioPig: a Hadoop-based analytic toolkit for large-scale sequence data
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A data analysis and coordination center for the human microbiome project
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Integrative analysis of multimodal mass spectrometry data in MZmine 3
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BAYESIAN SPATIAL-TEMPORAL MODELING OF ECOLOGICAL ZERO-INFLATED COUNT DATA.
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Coral life history and symbiosis: Functional genomic resources for two reef building Caribbean corals, Acropora palmata and Montastraea faveolata
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Accelerating Metagenomics Discoveries with Deep Learning
On July 6, scientists from Lawrence Berkeley National Laboratory (Berkeley Lab) and other institutions … the US Department of Energy (DOE) Joint Genome Institute (JGI), presented on generating vector representations of … that low sequence identity may belie. The technology he’s using is magical; transform any length of amino acid …
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Susannah Tringe Named 2020 DOE Lawrence Award Recipient
Congratulations to Susannah Tringe , one of eight scientists and engineers … of microbial assemblies, revealing the roles of microbial communities in carbon cycling, in interactions with plants, … Environmental Genomics and Systems Biology Division, and JGI’s deputy for user programs. She also leads the JGI’s …
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Ben Bowen
… developing high-performance computing workflows and integrating mathematics and chemistry for advanced analysis, … Leadership and Development Program Awardee 2005-2009: NIH K25 Mentored Career Development awardee 1998-2003: NSF … Analysis Toolkit: analyzing spatially defined samples using mass spectrometry imaging. Analytical chemistry, …
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