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An Age of CRAGE: Advances in Rapidly Engineering Non-model Bacteria
A group led by JGI scientists have made strides in improving and applying a method that allows researchers to quickly modify diverse bacterial … used with the model plant  Arabidopsis,  the plants grew better than when they were grown with non-engineered …
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Cold adaptive traits revealed by comparative genomic analysis of the eurypsychrophile Rhodococcus sp. JG3 isolated from high elevation McMurdo Dry Valley permafrost, Antarctica
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Ancient Algae Reveal Secrets of Plant Evolution
Research uncovers the genetic foundations that helped plants conquer land over 600 million … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … research and innovation program (grant agreement no. 852725; ERC-StG ‘TerreStriAL’). The work was further supported …
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A Grass Model to Help Improve Giant Miscanthus
Miscanthus  sequence offers insights into benefits of polyploidy … multiple chromosomes of Miscanthus arose by ancient hybridization (polyploidy) and insights into the dynamics of gene … Biosciences Institute, the DOE Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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In Hot Spring Microbial Mat, Viruses Ride “Piggyback”
For the first time, a team has comprehensively described host-virus dynamics in a microbial mat. The Science In microbial mats, communities of … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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For the Tiniest Archaea, A Genomic Switch of Friend or Foe
Meta-omics datasets show that CRISPR-Cas systems determine mutualism or … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … to J.F.B.). The work ( proposal doi: 10.46936/10.25585/60000800 ) conducted by the U.S. Department of Energy …
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A Collaboration to Improve Plant Genome Annotations Across Species
To provide broad plant genomic capabilities, the DOE Joint Genome … specializes in genome improvement for plants. As part of that partnership, the JGI and HudsonAlpha researchers led a team that  recently …
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Engagement Webinar: What Can You Do With An Approved CSP Functional Genomics Call Proposal?
On July 8, JGI’s DNA Synthesis Science group held a  JGI Engagement: Accessing … exist back then,” said Hal Alper, a University of Texas at Austin professor, “but we really first heard about the …
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New Research Sheds Light on Diversity in the Deep Sea
Microbial communities living near hydrothermal deep-sea vents hold … vents are ocean-floor openings in the Earth’s crust that emit hot, mineral-rich water. These vents are too deep in … the communities studied. The datasets are available on the JGI’s  Integrated Microbial Genomes & Microbiomes (IMG/M) …
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John Vogel
Dr. Vogel joined JGI in 2014 to establish a plant functional genomics … Prior to this, he served as a Research Molecular Biologist at the USDA for 12 years where he was a driving force behind … Lines 2014 Plant Journal 79: 361–374 DOI: 10.1111/tpj.12569 Hsia, et. al. 2017 Sequencing and functional validation …
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
Large-scale comparative analysis leads to identification of … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … Natalia Ivanova, senior author of the study and head of the JGI’s Microbiome Annotation Group. Many of these bacterial …
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Game On: High School Students Drive Everglades Metagenomics Study
In late June, Kathleen Lail, a member of JGI’s Sample Management … Energy, Earth and Environmental Education (E4) community-building workshop at the  2019 Association for Environmental …
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