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DOE Metrics
…     2,167     *Includes Illumina and PacBio sequencing platforms. **Operating Hours target is based on 98% of the total … 2,208 102% *Includes Illumina and PacBio sequencing platforms. **Operating Hours target is based on 98% of the total … to planned upgrade of the Laboratory Information Management System (LIMS) and temporary shut down of the sequencing …
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MGM Workshop at Fisabio Summer School 2025
… and seminars as well as practical hands-on sessions in bioinformatics and biostatistics Several sessions will be devoted … of the Integrated Microbial Genomes & Microbiomes (IMG/M) system, presented by Natalia Ivanova and Rekha Seshadri. …
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Picking Up Threads of Cotton Genomics
… , both faculty investigators at the HudsonAlpha Institute for Biotechnology. “The goal has been for all this new … is almost entirely made up of cellulose and it is a fiber model to understand the molecular development of cellulose. … Agricultural University (China), Texas A&M University System, U.S. Department of Agriculture-Agricultural Research …
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JGI Earth Month: Healthy Streams, Nutritious Microbes?
… relevant to living on a changing planet. Transcript for Audio Two special days occur in April: the 50th … that we use as indices. So it’s really quite a broad ecosystem approach. And that led me to get even more interested … biomass and then what the consequences are for the ecosystem. ALISON:  So, Ed is trying to understand how the …
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JGI & KBase at PAG XXVII
… from the DOE Joint Genome Institute (JGI) and the  DOE Systems Biology Knowledgebase (KBase) will be at Booth 509. … collaborative science opportunities. Learn how to apply for a project with the JGI Community Science Program, and how you can use the KBase system to accelerate your plant genomics research. Click …
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JGI Earth Month: Wetlands Work in #TenHundredWords
… living on a changing planet. Mo Kaze is a University of California (UC), Merced graduate student working with  Susannah … , JGI’s User Programs deputy and head of the Microbial Systems group through the  DOE Office of Science Graduate … Structure and Methane Production in California’s Canal System,” focuses on anthropogenic impacts on wetland …
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Making a Lichen Together
For the first time, a team analyzes the transcriptomes of a … to better understand lichen. The Impact Lichens are a model for inter-kingdom communication and cooperation. Their … carbon and nitrogen fixers in alpine and high latitude ecosystems, deciphering their internal molecular mechanisms can …
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Marchantia Pangenome Highlights Adaptive Nature of Plant Lineages
… on the full composition of genes, or pangenome, of the model plant  Marchantia polymorpha. Commonly known as … thus allowing them to spread across most of the plant’s ecosystems. The Impact For decades, the liverwort  M. polymorpha has been used as a …
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JGI Scientists Pen Genome Watch Articles
Woyke and other JGI researchers made their debut writing for the Nature Reviews Microbiology column last year — and … romp through the  evolution and domestication of yeast , a model eukaryote. The wide array of topics comes from the … sequencing and computational analysis that enable systems-based scientific approaches to these challenges.  …
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JGI Advisory Committees Code of Conduct
… our continuing contributions to advancing the research ecosystem. Their trust hinges on sustaining our record of excellence and respect, and for principles of integrity, safety and reliability. As … of the advisory committees serve as ambassadors and role models for the community, demonstrating the highest …
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JGI Early Career Researchers Featured in mSystems Special Issue
In a special issue of mSystems , out May 14, 2019, JGI researchers are among the … sorting (FACS) to sort cells into several small pools before sequencing to recover rare microbes. The technique was … sequencing and computational analysis that enable systems-based scientific approaches to these challenges.  …
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Viruses Reprogram Cells into Different Virocells
… it no longer looks or quacks like one, is it still a duck? For a team led by researchers from The Ohio State University … infections can affect the interactions within their ecosystems. Summary Microbes drive the energy and nutrient … diversity with an aim to improve predictive ecosystems models, University of Michigan’s Melissa Duhaime and The …
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