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Supercharging SIP in the Fungal Hyphosphere
… in industry and biotechnology for the production of  clean energy . Summary Arbuscular mycorrhizal fungi, the most … Livermore National Laboratory and the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User … the hyphosphere as an even more complex and dynamic environment. By further streamlining the process for …
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Fungal Friends or Foes in Plant Roots
… can in turn boost yields for both food and for candidate bioenergy feedstock crops. Summary A plant is like an office … National Research Institute for Agriculture, Food and Environment (INRAE) and the U.S. Department of Energy (DOE) … of the key community participants and enabling future metagenomics studies.   …
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Building Wet and Dry Lab Skills
… mentors Yi Zhai and John Vogel from the Plant Functional Genomics Group to study the effects of  Brachypodium … owned by JGI, and used Jupyter notebook for a programming environment used to work inside of a programming language. … Tamyra Long : JGI helped me see what working in this environment would feel like and look like. Watching you all …
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JGI Earth Month: The Unusual Metabolism That Helps Plants Withstand Drought
…   ALISON:  Hey! I’m Alison Takemura at the US Department of Energy Joint Genome Institute, or JGI.  Two special days … — helps plants that have it lose less water in a hot, dry environment. Figuring out how plants evolved to deal with … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …
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Marchantia Pangenome Highlights Adaptive Nature of Plant Lineages
… plant lineages makes it ideal for comparative genomics studies, offering insight into genes critical for … Initiative , a project supported by the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of … that could be applied toward DOE-relevant bioenergy and environmental interests.  Summary As the planet has changed, …
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Tanja Woyke
… deciphered function and host-symbiont interplay using metagenomics. Taking on a Research Scientist position in 2007, she switched gears from metagenomics to single-cell genomics, which is now her primary interest and passion. Dr. … for Bigelow Laboratory for Ocean Sciences Single Cell Genomics Center (2013-current) Science Advisory Board Member …
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The JGI announces FY25 awardees for our Community Science Program Annual Call
… engineering and biocatalyst design will target sustainable energy solutions, focusing on lignocellulosic thermophiles … projects relevant to the DOE’s Office of Biological and Environmental Research (BER) missions in sustainable biofuel … well as our smaller-scale New Investigator and Functional Genomics calls, here on our website.   See below for the …
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
… Cole is a research scientist at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of … interaction that allows plants to better survive in those environments,”  Karen Serrano said. She is first author of this paper and a graduate researcher at the Joint BioEnergy Institute (JBEI). Cole led the work in collaboration …
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Ecogenomics of Groundwater Phages Suggests Niche Differentiation Linked to Specific Environmental Tolerance
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Habitat-Lite: A GSC Case Study Based on Free Text Terms for Environmental Metadata
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Conserved environmental adaptations of stream microbiomes in the hyporheic zone across North America
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JGI Workshops at PAG
… Jan. 12 workshop: The Rapidly Expanding Genomics of Algae   With advances in genomics technologies, keen interest in the bioenergy and biotechnology potential of algae, and sampling of …
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