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Making a Lichen Together
… that in this symbiosis going back hundreds of millions of years, accidental gene swaps via horizontal gene transfer … and Policy (for DNA sequencing and assembly); by a three-year subcontract to DA, FL, and FD (for bioinformatics) from … the U.S. DOE Office of Science under Contract No. DE-AC02-05CH11231. The work of MP, DL and SSM was supported by the …
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An Automated Tool for Assessing Virus Data Quality
… on open ocean samples. CheckV identified a total of 44,652 complete or near-complete viral genomes across both … the U.S. Department of Energy under contract no. DE-AC02-05CH11231. This work was also supported the grant … Foundation (FAPESP). A.P.C. received a scholarship #2018/04240-0 from FAPESP. … CheckV on IMG/M Data portal … …
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Bacteria and Fungi Divvy Up the Work in Forest Floor
… than expected. The transcriptome data had suggested about a 50/50 split between fungal and bacterial enzymes. Yet, they … work was supported by the Czech Science Foundation (18- 25706S and 20-02022Y), by the Ministry of Education, Youth …
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
Germany. The BGC Repertoire in Actinobacteria Over the years more than 3,400 genomes have been sequenced from … new GEBA-Actino genome sequences were combined with nearly 5,000 publicly available ones and 1,100 metagenome-assembled …
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JGI@25: The Little Alga That Could
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of … is interesting because in humans (where it’s called RECQL5), the loss of this protein is associated with cancers. …
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
… biofuel feedstocks with less fertilizer. For millions of years, underground fungi have lived in symbiosis with plant … gene expression within circular capture areas roughly 55-microns in diameter — about the width of a human hair. At …
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I-Min (Amy) Chen
Development Systems at Gene Logic, Inc. from 1997 to 2005, responsible for the development of key components of Gene …
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Climate Change Threatens Base of Polar Oceans’ Bountiful Food Webs
… waters that have an average surface temperature of about 58° Fahrenheit (14° Celsius) — a cool intermediate to the … from the Intergovernmental Panel on Climate Change (IPCC) 5th Assessment Report to predict where and how fast the 14° … and prokaryotic combined) contribute to an estimated 50 percent of the world’s fixed carbon, altering the balance …
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Giant Bacteria Found in Guadeloupe Mangroves Challenge Traditional Concepts
… usually visible without the assistance of microscope. “It’s 5,000 times bigger than most bacteria. To put it into … conducted some microscopy studies over the next couple of years, and realized it was a sulfur-oxidizing prokaryote. … at carbon storage, you’ll find that they contribute 10-15% of the carbon stored in coastal sediments,” said Woyke, …
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