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Genomes of 13 domesticated and wild rice relatives highlight genetic conservation, turnover and innovation across the genus Oryza
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Genome‐wide scans of selection highlight the impact of biotic and abiotic constraints in natural populations of the model grass Brachypodium distachyon
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A multi-omic survey of black cottonwood tissues highlights coordinated transcriptomic and metabolomic mechanisms for plant adaptation to phosphorus deficiency
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Comparison of short-read and long-read metagenome assemblies in a natural soil community highlights systematic bias in recovery of high-diversity populations
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A perspective: Metatranscriptomics as a tool for the discovery of novel biocatalysts
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Novel Z-DNA binding domains in giant viruses.
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Simon Roux
… Dr. Roux joined the JGI in 2017 to lead viral genomics research as part of the … Program. His responsibilities include the development of novel computational tools to identify virus sequences, the … interactions in microbial systems. Through a 2021 DOE Early Career Research Program, Dr. Roux established and …
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Does time matter? Intraspecific diversity of ribosomal RNA genes in lineages of the allopolyploid model grass Brachypodium hybridum with different evolutionary ages
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A Revamped Amplification Method that Enables Nearly Complete Single-Cell Genomes
… more complete genomic results from single cells. The Science Studying the  genomes of microorganisms is … in our immediate microbiome. The U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … Joint Genome Institute (https:// ror.org/04xm1d337), a DOE Office of Science User Facility, is supported by the …
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A Synthetic Gene Library Yields a Previously Unknown Glycoside Phosphorylase That Degrades and Assembles Poly-β-1,3-GlcNAc, Completing the Suite of β‑Linked GlcNAc Polysaccharides
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Lipid analysis of CO2-rich subsurface aquifers suggests an autotrophy-based deep biosphere with lysolipids enriched in CPR bacteria
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A Pinch of Salt Activates Silent Gene Clusters in Streptomyces
… omics methods to examine microbial chemical production. The Science Soil bacteria in the genus Streptomyces are nature's … of multiple omics data from various environments — that JGI users can leverage to create a more complete picture of … conditions. Researchers with the Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science …
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