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… is working on the display and visualization of large omics data. …

… multi-institutional research team that combined field data with a reference switchgrass genome to associate … hosted two JGI Engagement Webinars promoting the JGI fungal data portal MycoCosm and the algal portal PhycoCosm. … aspects of the Integrated Microbial Genomes & Microbiomes (IMG/M) Nikos Kyrpides was part of an international research …

… of large amount isolate genomic and metagenomic data stored in Oracle databases, Berkeley DB and files in various formats. …

… metagenomes. He also works on automating intra-department data exchange and assists with large scale computations on …

… used 1,870 known virus-host pairs to generate a matrix of data points.  Applied to 216,015 high-quality virus sequences in the IMG/VR database, the iPHoP program generated many new …

We work with start-ups and mature companies, as long as the data are not proprietary. In addition, the JGI has a … instrumental support, how much help can users expect for data analysis of the different omics analysis? Are users expected to be trained to handle the huge amounts of data for each of the different analysis? A:  We go from …

… of fungi, by lifestyles. The machine “learned” to identify data generated in part through the 1000 Fungal Genomes … fungal lifestyles of saprobes and pathogens based on the data provided. In this proof of concept test, the team … S et al.  Studies in Mycology , 2020.) Using whole genome data from newly sequenced genomes, they also built a …

… of Symposium Goals Metagenomic and single-cell sequence data have provided a means to access novel microbial … approaches to assign functional “read out” to sequence data. Moving from cataloging microbial diversity to …

… effective management and strategic objectives for the JGI’s data science, informatics and information technology (IT) …