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Variation and Inheritance of Small RNAs in Maize Inbreds and F1 Hybrids  
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Thousands of small, novel genes predicted in global phage genomes
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You Can Move, But You Can’t Hide
… Researchers at the JGI develop a tool to quickly and accurately identify mobile … at Lawrence Berkeley National Laboratory (Berkeley Lab), with computing resources provided by NERSC, another user … receiving excellent feedback from the general research community. It can be  downloaded through NERSC . …
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Understanding Wildfire Recovery, Starting in Soil
… at the soil microbes present a year after a wildfire. The Science After a wildfire burns, recovery begins at the forest floor. Within the soil, a microbiome of bacteria, viruses and fungi … and growth.  This study builds on the pyrophilous fungi the JGI has previously sequenced , and provides a powerful …
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Introducing New Members of the JGI User Executive Committee
… The JGI welcomes three new members to their User Executive … on the UEC is an opportunity to help develop the JGI’s community outreach efforts with diversity, equity and inclusion in mind. Microbiome …
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Kjiersten Fagnan
… Kjiersten Fagnan began working with JGI in 2012 as a NERSC bioinformatics computing consultant, … the JGI in 2016, and in 2018 was hired to be the JGI’s Data Science and Informatics department head.  Dr. Fagnan is also … Kjiersten Fagnan is the JGI's Chief Informatics Officer. Click to learn more about …
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2022 Progress Report
… (IGB) seen above is home to the DOE Joint Genome Institute (JGI). Researchers from the DOE Systems Biology Knowledgebase … The mission of the JGI is to provide the global research community with access to the most advanced integrative genome science …
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Virus-Microbe Interactions of Mud Island Mangroves
… his dissertation. Some of his research was conducted at the JGI through the DOE Office of Science Graduate Student … laboratories or national user facilities. Baker had worked with the JGI through a Community Science Program (CSP) proposal, and Rambo’s …
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Gut Fungi: Unexpected Source of Novel Chemicals
… expensive feat thought to be too costly for them. The Science Anaerobic fungi, which die in the presence of … in their hunt for anaerobic fungi. By growing extracts without oxygen in ruminant fluid — which smells terrible … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Expanding Horizons with the 2025 JGI-UC Merced Internship Cohort
… a DOE Office of Science User Facility. This year, the 12th JGI-UC Merced cohort consisted of three undergraduate … and technical writing while also making new connections with both researchers and other interns. At the end of the … performance computing and had an amazing opportunity to collaborate and network with talented scientists and staff …
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IMG/M-HMP: A Metagenome Comparative Analysis System for the Human Microbiome Project
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Game On: High School Students Drive Everglades Metagenomics Study
… In late June, Kathleen Lail, a member of JGI’s Sample Management Group, attended a conference in … of Education (AICE) Biology class at Florida’s Boca Raton Community High School. The course had a defined set of objectives, and started with an image of a spoonful of dirt with the question: Do …
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