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The Phaeodactylum genome reveals the evolutionary history of diatom genomes
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Waiting to Respire
… Genomes from uncultivated bacteria offers clues to ancestral bacteria’s energy sources. More than two billion years ago, cyanobacteria acquired the ability to produce … and harness energy. As reported January 28, 2019 in Nature Communications , two research teams joined forces and data …
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Effects of sample treatments on genome recovery via single-cell genomics
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Expanding the genomic encyclopedia of Actinobacteria with 824 isolate reference genomes
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SPRUCE-ing Up Science
… A former JGI intern is now applying his internship lessons on presentations to peatlands Travis Lawrence sits in … At ORNL, Lawrence brings a bioinformatics expertise, a combination of biology and computer science, to reveal clues … . “There was a lot of freedom to explore,” he recalled. His project involved developing an algorithm and although the …
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The Power of One, Amplified
… A preview of how large-scale single cell genomics complements metagenomics studies. The Science Researchers demonstrated the value of conducting large-scale single cell … that were missed within paired metagenome assembled genomes (MAGs), and that dominant populations varied with …
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Virus Discoveries that Keep Getting Bigger
… viruses. The Science In the last thirty years, in environments all over the world, scientists have discovered … Nucleocytoviricota , these giant viruses boast larger genomes than many bacteria. Until recently, understanding of … The Impact In their existence as large, cosmopolitan, and complex parasites, giant viruses often infect microeukaryote …
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JGI@25: Mapping Switchgrass Traits with Common Gardens
… In honor of the JGI's 25th anniversary in 2022, we have … crop. In 2018, the JGI had sequenced and assembled the genomes of two varieties of a close relative and model … have also harnessed the switchgrass gardens for other projects. At the 2021 JGI Annual Meeting, David Lowry talked …
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De novo transcriptome assembly of drought tolerant CAM plants, Agave deserti and Agave tequilana
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Diel rewiring and positive selection of ancient plant proteins enabled evolution of CAM photosynthesis in Agave
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Complete Genome of Oil-Rich Alga Reveals Ideal Platform for Bioengineering
… decoded the genome of an oil-producing green alga, and demonstrated precise gene targeting in the genome in the … also simplifies metabolic modeling and pathway optimization for enhanced lipid production. Also notable, researchers … researchers offer a gapless end-to-end sequence of complete chromosomes. Auxenochlorella solves a major …
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Genomics of alphaproteobacterial methylotrophs
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