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The genome portal of the Department of Energy Joint Genome Institute: 2014 updates
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Section-level genome sequencing and comparative genomics of Aspergillus sections Cavernicolus and Usti
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JGI@25: Expanding Metagenomics to Capture Viral Diversity
… In honor of the JGI's 25th anniversary in 2022, we have … organisms. As they infect microbes like bacteria, algae and protists, all kinds of viruses impact many ecological … Beginning in the early 2000s , these environmental metagenomes began to offer a window into viral existence. Along …
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A Powerful Technique to Study Microbes, Now Easier
… Lawrence Livermore National Lab biologist Jennifer Pett-Ridge collaborated with JGI scientists on an ambitious project: to bring in robots to help process experiments that …
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Olpidium, The Key to the Origin of Terrestrial Fungi
… Before 2006, Olpidium was one of the many obscure fungi of Chytridiomycota (the … habitats. The work is part of the JGI’s 1000 Fungal Genomes Project, which aims to provide genomic information for every … of Science User Facility  located at Lawrence Berkeley National Laboratory, is committed to advancing genomics in …
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Modulation of sensory perception by hydrogen peroxide enables Caenorhabditis elegans to find a niche that provides both food and protection from hydrogen peroxide
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Transcriptomics reveal a mechanism of niche defense: two beneficial root endophytes deploy an antimicrobial GH18‐CBM5 chitinase to protect their hosts
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Bacteria and Fungi Divvy Up the Work in Forest Floor
… Bacterial enzymes play second fiddle to those from fungi when it comes to breaking … to identify proteins, the team compiled DNA sequences (metagenomes) and messenger RNA sequences (transcriptomes) from … sequences assembled as part of its 1000 Fungal Genomes Project . To map microbial activity, Baldrian’s team …
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JGI at the AGU Fall Meeting
… Meeting, with the theme “Science is Society,” hosts sessions in New Orleans and online. Register for the meeting … context for thousands of newly sampled microbial genomes from North American watersheds (Invited)” 4pm CST … poster B45O-1813  : Maggie Bowman, PNNL: “EMSL’s 1000 Soils Project: core collection strategy and data types available” …
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JGI Announces FY26 Large Scale Portfolio for Our Community Science Program
… Coleman and Hugh Cross; [Below] Zac Freedman, Martin Jonikas, Lotus Lofgren, Fumito Maruyama, Lauren Stadler, … 14 scientists selected for our 2026 Community Science Program Large Scale call. This portfolio accelerates … biomass processing. This year’s portfolio also includes a project led by the National Ecological Observatory Network …
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Comparative genomics reveals a dynamic genome evolution in the ectomycorrhizal milk‐cap (Lactarius) mushrooms
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Comparative genomics reveals dynamic genome evolution in host specialist ectomycorrhizal fungi
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