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Metabolomics Program
The JGI’s Metabolomics Program works to uncover the roles of small molecules in biological systems, linking them with … DOM cycling. ENVnet can be used in your custom Python applications but highly recommend using the workflow in  GNPS2 .   … In support of user science, the JGI Metabolomics …
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From Stress to Growth: The adaptive mechanisms of algae in changing Arctic waters
… ice in the Arctic has decreased by more than 30% in terms of quantity and thickness. Replacing older, thicker ice with … survival of the microorganisms that live there.  A  Communications Biology article highlights how one microalga … a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab). In their …
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Jinghua Jenny Huang
Jenny is working on the display and visualization of large amount isolate genomic and metagenomic data stored in Oracle databases, Berkeley DB and files in various formats. …
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Honey Bee Gut Microbiota Divvy Up Dinner
Scientists find bee gut microbes have a division of labor when it comes to metabolizing complex … Genome Institute, a DOE Office of Science User Facility  located at Lawrence Berkeley National Laboratory, is committed to advancing …
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Hydrothermal Vents and International Science: A Postdoc’s Visit to the JGI
Sciences and Engineering Division at King Abdullah University of Science and Technology (KAUST) in Saudi Arabia. …
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Fungus Fuels Tree Growth
… start pinning down how a fungal symbiont spurs growth of poplar, a potential biofuel feedstock.     The Science … and poplar, a team led by Hui-Ling (Sunny) Liao of the University of Florida collected forest samples of poplar and … that lipids could act as a bridge of interkingdom communication between the plant and fungus. Discovering how …
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JGI Portals
… constant developments to meet the ever-changing demands of our users. … Download plant, algal, fungal and microbial … and analytical tools for all JGI sequencing projects. In 2021, the JGI launched the Data Portal to eventually replace … enriched with functional annotation, taxonomic classification, and microbial host predictions.  … The Mycocosm web …
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JGIota: Sequencing Shiitakes with David Hibbett
David Hibbett of Clark University fills us in on the kind of decay that makes shiitake mushrooms special. This week, …
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JGIota: The Algae Nicknamed ‘Chlamy’
… reinhardtii – that’s managed to have a big impact. UC Berkeley plant biologist Sabeeha Merchant explains why she … in the Environmental Genomics & Systems Biology Division of the Berkeley Lab Biosciences Area.] …
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Digging into Microbial Ecosystems Deep Underground
… “Microbes underpin so much of what we see on earth in terms of nutrient cycles and … nutrients in these systems.” -Mike Wilkins, Colorado State University GI users and microbiome researchers Mike Wilkins … National Laboratory. Letters of Intent are due March 16, 2022 to freely access resources at multiple DOE user …
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River microbiomes from around the world: Kelly Wrighton
Kelly Wrighton and her group at Colorado State University in Fort Collins have a massive undertaking: …
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At the Forefront of Terrestrial Virus Research
… is finishing his PhD in Microbiology at The Ohio State University, co-advised by Drs. Virginia Rich and Matthew …
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