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… (CSP) call of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … users to explore data and share reproducible analyses with collaborators and the broader community. The approved … through the  CSP New Investigator call . It is the first project to have successfully evolved into a full-scale …

… scientist at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … — but the experts we were able to work with on this project to ask questions about structure and function,” … lines came from UC Berkeley professor and longtime JGI collaborator Sabeeha Merchant’s group. In 2011, they …

… Dr. Mouncey joined the DOE Joint Genome Institute in 2017 as the fourth Director in its … to build and position JGI as a leading integrative genome science user facility.  In addition to serving as JGI … of Energy biology programs, and represents the Joint Genome Institute at national and international forums. …

… recovered and identified from environmental samples (metagenomes). However, the quality and completeness of metagenome-assembled virus sequences vary widely. In a previous … to over 2.4 million viral genomes available in the latest release of IMG/VR . CheckV is freely available for download …

… consequences of microbe-microbe interactions. Using metagenomes recovered directly from environmental samples and … dependent on the other for required nutrients—is genome size. The obligate symbiont’s genome is often reduced … archaea first outlined by JGI scientists and their collaborators in 2013. While most DPANN lineages are …

… this identification, metabolomics enables functional genome annotation, improves understanding of the role small …

… to identify proteins, the team compiled DNA sequences (metagenomes) and messenger RNA sequences (transcriptomes) from … The transcriptomes edit out these distractions. Combining genome and transcriptome information allowed the team to … sequences assembled as part of its 1000 Fungal Genomes Project . To map microbial activity, Baldrian’s team …

… genes of more than 100 algae. The Science Interested in the genomes of algae? You now have one place where you can … and enthusiasts to look deep into more than 100 algal genomes, compare them, and visualize supporting experimental … In part because of this evolutionary diversity, algal genomes can be incredibly complex and difficult to sequence …

… Through our CSP Functional Genomics call , we look for projects that will leverage the JGI’s DNA synthesis and omics capabilities to enhance understanding of gene and genome function.  Below find a list of the six researchers …

… data portal , an interactive collection of sequenced fungal genomes, omics data and comparative analysis tools. … genomes and those external genomes that enable JGI CSP projects – please first contact us at [email protected] … is no ‘magic’ number. Through a combination of co-PIs, collaborators, and letters of support you can communicate …

… of the proposals. Upon approval from JGI reviewers, the DOE project managers review the proposals. The proposer of … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility … of basic research in the physical sciences in the United States, and is working to address some of the most pressing …