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An Enzyme Family that Helped Shape Nitrogen Metabolism on Our Planet
… this enzyme family,” said Sang-Woo Han, one of the co-first authors of this work.  Han is an Assistant Professor at … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … for computational analysis of the AT enzyme family, the JGI provided DNA synthesis capabilities to enable functional …
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JGI-UC Merced Interns Share Their 2021 Experiences
… from UC Merced spent eight weeks working virtually with JGI mentors to investigate rigorous research projects, hone … year and continue working on their research project! The JGI-UC Merced internship program was founded in 2014 with … Analysis of Genus Roseovarius … Implementing a Scalable JGI-RQC Pipeline on the Cloud …
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Fungus Fuels Tree Growth
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, through its  … Ecosystems (ARBRE) (ANR-11-LABX 0002 01 to F. Martin), JGI Community sequencing program project (CSP570, …
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Synthetic Biology Informatics Group
… develop, deploy, and maintain software that support the JGI’s Synthetic Biology Program .  Representative software … and associated tools, which track samples through the JGI’s Synthetic Biology pipeline as well as provide process …
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High Five: Celebrating the JGI-UC Merced Genomics Internship Program
UC Merced students have contributed to the research of 13 JGI scientists since the program’s inception. In 2014, JGI’s Zhong Wang and Science Programs Deputy Axel Visel … produced during Ul-Hasan’s JGI internship led to her co-authorship on a 2017 Plos Biology “The JGI-UC Merced …
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Daniel Udwary
Dr. Udwary serves as a computational biologist for JGI’s Secondary Metabolites group. His research interests … gene clusters in bacteria and fungi. Prior to joining the JGI, he spent time as a faculty member at the University of … HPC consultant with NERSC. Dr. Udwary co-hosts JGI’s "Natural Prodcast" podcast, a "fireside chat"-style …
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Simon Roux
Dr. Roux joined the JGI in 2017 to lead viral genomics research as part of the … to link viruses to their host(s), collaboration with JGI users for analyzing viral datasets, and the organization … virome reveals diverse clades of bacteriophages. Cell 185, 4023–4037. Coclet et al., 2023. Virus diversity and activity …
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Matt Blow
Dr. Blow joined the JGI in 2009, and currently heads the User Support Analysis … in human and other vertebrate genomes. When he joined the JGI, he worked as a project scientist and then as a research … and other functional genomics datasets generated by JGI user science projects. … BS in Biochemistry and …
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Tanja Woyke Elected to American Academy of Microbiology
Congratulations to the JGI’s Tanja Woyke , who has been elected to the American … in the field of microbiology and are relied upon for authoritative advice and insight on critical issues in … Berkeley National Laboratory (Berkeley Lab), Woyke has led JGI’s Microbial Genomics Program since 2009 and heads the …
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Katherine Louie
Dr. Louie joined the JGI in 2014 to develop the metabolomics program, and in 2019 … the metabolomics capabilities and product offerings for JGI users.  Using cutting-edge mass spectrometry-based … Sciences and Chemical Engineering.  DOI: 10.1016/b978-0-12-409547-2.14834-6 4. Roth MS, Gallaher SD, Westcott DJ, Iwai …
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Crysten Blaby-Haas
Blaby-Haas joined the JGI in 2022 as lead of the Biomolecular Materials Initiative, a partnership between JGI and the Molecular Foundry, a nanoscale research and … the development of a joint user capability between the JGI and Molecular Foundry for genome-encoded biomaterial …
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Rex Malmstrom
… of the Microscale Applications group. Before joining the JGI in 2010, he made the first ever measurements of in situ … to culture these microbes in the lab. After joining the JGI, he formed the Microscale Applications group to operate … slow-growing archaeal− bacterial consortia. PNAS 113 (28), E4069-E4078 Bendall, M.L. et al. 2016. Genome-wide selective …
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