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High Five: Celebrating the JGI-UC Merced Genomics Internship Program
UC Merced students have contributed to the research of 13 JGI scientists since the program’s inception. In 2014, JGI’s Zhong Wang and Science Programs Deputy Axel Visel … produced during Ul-Hasan’s JGI internship led to her co-authorship on a 2017 Plos Biology “The JGI-UC Merced …
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Daniel Udwary
Dr. Udwary serves as a computational biologist for JGI’s Secondary Metabolites group. His research interests … gene clusters in bacteria and fungi. Prior to joining the JGI, he spent time as a faculty member at the University of … HPC consultant with NERSC. Dr. Udwary co-hosts JGI’s "Natural Prodcast" podcast, a "fireside chat"-style …
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Simon Roux
Dr. Roux joined the JGI in 2017 to lead viral genomics research as part of the … to link viruses to their host(s), collaboration with JGI users for analyzing viral datasets, and the organization … and currently leads the Viral Genomics group at the JGI to further explore the ecological and evolutionary …
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Matt Blow
Dr. Blow joined the JGI in 2009, and currently heads the User Support Analysis … in human and other vertebrate genomes. When he joined the JGI, he worked as a project scientist and then as a research … Enhancer Landscape During Development. Cell 155:1521-31. Attanasio et al. 2013. Fine Tuning of Craniofacial …
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Tanja Woyke Elected to American Academy of Microbiology
Congratulations to the JGI’s Tanja Woyke , who has been elected to the American … in the field of microbiology and are relied upon for authoritative advice and insight on critical issues in … Berkeley National Laboratory (Berkeley Lab), Woyke has led JGI’s Microbial Genomics Program since 2009 and heads the …
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Katherine Louie
Dr. Louie joined the JGI in 2014 to develop the metabolomics program, and in 2019 … the metabolomics capabilities and product offerings for JGI users.  Using cutting-edge mass spectrometry-based … the Green Alga Chromochloris zofingiensis. Plant Cell. 2019;31: 579–601. 5. Erbilgin O, Rübel O, Louie KB, Trinh M, Raad …
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Crysten Blaby-Haas
Blaby-Haas joined the JGI in 2022 as lead of the Biomolecular Materials Initiative, a partnership between JGI and the Molecular Foundry, a nanoscale research and … to carbon metabolism in cyanobacteria. Nature Comm 15:3167. Hammack AT, Blaby-Haas CE. (2024) Machine learning …
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New Research Sheds Light on Diversity in the Deep Sea
… to the study as well as  genome analysis, providing authors a more complete picture of the taxonomic composition … the communities studied. The datasets are available on the JGI’s  Integrated Microbial Genomes & Microbiomes (IMG/M) …
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Rex Malmstrom
… of the Microscale Applications group. Before joining the JGI in 2010, he made the first ever measurements of in situ … to culture these microbes in the lab. After joining the JGI, he formed the Microscale Applications group to operate … a similar single-cell genomics pipeline that provides JGI users access to the genomes of uncultured microbes.  His …
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Jane Grimwood Named HudsonAlpha Genomics Chair
Grimwood heads the Library Construction group for the JGI Plant Program . Her collaborations with the JGI began soon after the JGI was established to work on the Human Genome Project in …
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Partnering with CalTeach – Training the Next Generation STEM Workforce
As set out in the JGI Five-Year Strategic Plan – “Beyond Basepairs, A Vision … to the resources and disciplines advanced by the JGI, we seek to inspire more students to enter the science, … and inclusive pool of talent for career opportunities at JGI and Berkeley Lab. …
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Forming Scientific Connections and Building Community
The 11th cohort of JGI-UC Merced interns pick highlights from their summer … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, hosted three … and having responsibilities. I like the environment that JGI brings and being able to be a part of groundbreaking …
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