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“A STEM career is in reach and accessible”
… Interns from Antioch High School. Though a partnership with Biotech Partners, a nonprofit that provides underserved youth in the Bay Area with personal, academic and professional development experiences that increase participation in …
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A Collaboration to Improve Plant Genome Annotations Across Species
… the DOE Joint Genome Institute works in partnership with the HudsonAlpha Institute for Biotechnology, which … specific conditions – in over a dozen plants. To learn more about the project, HudsonAlpha’s Research Communication … It was developed to improve plant genome annotations at the US Department of Energy (DOE) Joint Genome Institute (JGI)*, …
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Six join FICUS program in 2026
… six to the Facilities Integrating Collaborations for User Facilities (FICUS) program for fiscal year 2026, in partnership with the Environmental Molecular Sciences Laboratory (EMSL) … what each facility could generate individually. Learn more about the projects below. …
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Len Pennacchio
… Pennacchio joined the DOE Joint Genome Institute and has focused on applying state-of-the-art molecular methods to … at Stanford University where he uncovered the genetic cause of a rare form of human epilepsy and subsequently generated one of the first mouse models for this common neurological disorder. In 1999, …
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Iron-rich Microbial Mats’ Main Players: Marsarchaeota
… and characterized a novel phylum-level lineage of archaea with at least two major subgroups dubbed Marsarchaeota. The … Iron cycling is thought to have played a key role in the development of life on Earth; the iron-oxide microbial mats … (thermophilic) microbes are of interest for their potential use in number of biotechnological applications. Molecular …
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Improving the Cacao Genome and Phytozome
… Global chocolate brands can’t exist without cocoa According to the  International Cocoa … annotation was developing a high quality node for cacao used for systemic orthology to enable use for both cacao functional biology and breeding.     … of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence Berkeley National …
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Identifying the Microbial Cleanup Crew at a Superfund Site
… Dehalococcoides mccartyi and  Dehalobacter restrictus,  that work together to break down PCE into the chemical … by Congress in 1980 for Superfund sites which are hazardous waste areas that require cleanup and long-term … that can help bioremediate toxic substances has led to the development of cost-effective environmental cleanup …
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New Research Sheds Light on Diversity in the Deep Sea
… vents are ocean-floor openings in the Earth’s crust that emit hot, mineral-rich water. These vents are too … of these microbial communities could lead to the development of new biotechnologies around clean energy,  … seeps through cracks in the Earth’s crust and reacts with very hot rocks below, becoming an extremely hot, …
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Kjiersten Fagnan
… Kjiersten Fagnan began working with JGI in 2012 as a NERSC bioinformatics computing … Research Division. As a postdoc, her research focused on stable and accurate computational methods for … Dr. Fagnan became the JGI-NERSC Engagement Lead with a focus on adapting JGI workloads to run on supercomputing …
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JGI@25: From Life at the Extremes to Editing Genomes
… ecosystems around the world, conducting iterative searches using statistical analyses to continuously refine and … Such proteins have been adapted for therapeutic application development by Mammoth Biosciences, one of several companies … and Management.” So begins a passage from Doudna’s book about her meeting with Banfield. (Banfield’s recounting of …
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Effects of Polar Light Cycle on Microbial Food Web
… Populations of Antarctic lake microbial communities change with the seasons. The Science Light-harvesting bacteria … scant, Ace Lake’s bacteria instead go through a boom and bust cycle aligned with light availability. A long-running … cycling takes place only on a microbial level. Previous studies focused on the Southern Ocean have found that in …
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Inspiring STEM Careers Through a Hands-on Everglades Microbiome Study
… Journal publication caps JGI pilot project with fledgling Florida high school scientists. The Florida … peer through the waters and clouds of insects hover just above. Described as a “river of grass” that stretches … to apply the latest molecular techniques to learn more about the microbial communities in the Arthur R. Marshall …
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