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David Hibbett of Clark University fills us in on the kind of decay that makes shiitake mushrooms special. This week, he and 39 collaborators published a paper tracing how these mushrooms have evolved.  …

… annotation and analysis. The JGI and KBase seek to enable users to seamlessly access and analyze data on scales … JGI and KBase are designated DOE Office of Science Public Reusable Research (PuRe) Data Resources are authoritative …

Research Division.. As a postdoc, her research focused on stable and accurate computational methods for … Extreme-Scale Computing Conference . … UC CORO participant, 2021 Member of the Networking and Information Technology … 2018 NERSC, CRD Petascale Postdoctoral Fellow … Education … About the JGI Chief Informatics Officer … Selected …

The Impact Traditional methods for breaking down biomass use aerobic methods (those using oxygen) to remove lignin and transform the remaining … (MAO), Institute for Collaborative Biotechnologies grants W911NF-09–D-0001 and W911NF-19-2-0026 (MAO), US Army Research …

… allows anyone to freely investigate the genes of more than 100 algae. The Science Interested in the genomes of algae? … an interactive browser that allows algal scientists and enthusiasts to look deep into more than 100 algal genomes, … genetic underpinnings responsible for these traits takes us closer to harnessing algae for bioenergy and the greater …

… (DOE) Joint Genome Institute (JGI), a DOE Office of Science user facility, 24 large-scale proposals have been accepted … Tara Oceans Expeditions that took place between 2009 and 2013, the  Chaetoceros genus has been identified as the most … the University of Minnesota is interested in learning more about the fungal endophytes of soybean and how they deter …

Pennacchio joined the DOE Joint Genome Institute and has focused on applying state-of-the-art molecular methods to … Enhancers VISTA Cardiac Enhancer Browser ENCODE FaceBase … 2021-  NLM Board of Regents Working Group on “NIH … in Genome Biology & Technology (AGBT)” … Education … About the Deputy of Genomic Technologies … Selected …

In this episode, we peer into plant cells. Researchers are using measurements from single cells to understand which … and more. And eventually, their findings could help us grow better crops, with less impact on our planet. …

For the last 15 years, Ray Turner has been one constant for the Joint … JGI’s Operations Deputy has come to a close as this previously retired Naval Commander retires from Berkeley Lab. For … is still good. “I noticed right away,” said Ellen Ford about Ray’s personal impact on her, “that you started …

… be single bacterial cells, visible to the naked eye. The unusual size is notable because bacteria aren’t usually … Antilles and a co-first author on the study, performed the 16S rRNA gene sequencing to identify and classify the … explained. “This kind of discovery opens new questions about bacterial morphotypes that have never been studied …

… identify mobile genetic elements like plasmids and viruses. The Science Mobile genetic elements (MGEs) are genetic … biogeochemical cycles around them. By understanding more about the genomics of MGEs and their evolution at the … the JGI’s  IMG Virus Resource (IMG/VR) , now with more than 15 million viral genomes. It was also key to developing the …

Tracing gene regulatory networks in the model fungus  Neurospora crassa . The Science A team led by … degrade the plant biomass. In order to learn more about these regulatory networks in the model fungus  N. … tree of life, enriching the work being done as part of the 1000 Fungal Genomes Project. Funding for the project was …