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… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of … specific algae. The reference genome is cited in roughly 10% of all since-released publications on green algae. “The … is interesting because in humans (where it’s called RECQL5), the loss of this protein is associated with cancers. …

… to quickly modify diverse bacterial genomes. In 2019, the JGI’s Yasuo Yoshikuni and his team  announced in  … this Lawrence Berkeley National Laboratory (Berkeley Lab) Newscenter story and this piece in  Current Opinion in …

… led the work in collaboration with JBEI as part of the 2021 Laboratory Directed Research and Development (LDRD) … gene expression within circular capture areas roughly 55-microns in diameter — about the width of a human hair. At …

… large-scale single cell genomics by collecting nearly 500 single cells from a single low diversity hot spring … In these springs, temperatures can reach as high as 80°C (~190°F), yet microbes thrive here. The communities in this … a shotgun metagenome, and a single cell dataset of nearly 500 single cell genomes. The single cell portion of this …

… to terrestrial habitats. The work is part of the JGI’s 1000 Fungal Genomes Project, which aims to provide genomic … at the time. Following the publication of their paper in 2011, Dr. Sekimoto from University of British Columbia and … Taking a conservative approach, we were able to assemble ~75% of the Olpidium genome and retrieve ~300 markers for …

… The JGI Engagement Webinar held November 5, 2020 (watch the  video below, captions are available) … proposal calls, projects can request up to 50 polar and 150 nonpolar metabolomics analyses. For the other calls, we … Annotation and Gene Integration . ACS Chem Biol. 2019 Apr 19;14(4):704-714. doi: 10.1021/acschembio.8b01107. …

… When Lawrence embarked on his PhD program at UC Merced in 2013, this field was just beginning to develop and expand … resilience to warming . New Phytol. 2022 Jun;234(6):2111-2125. doi: 10.1111/nph.18072.   Byline: Ashleigh Papp …

… of plants have resulted in a paper published October 5, 2020 , in Nature Biotechnology . Kellogg and her … led the team to identify a gene called Less Shattering 1 (SvLes1); gene editing studies led by co-first author Pu … were generated, though the final analyses focused on 598 individuals. Schmutz and his team assembled and …

… data and comparative analysis tools. Questions and Answers 1.  Q(uestion): Do you accept oomycetes to be proposed for … statistics across genomes (see video on comparative tools) 5.  Q: Is there any programmatic access to the portal? Or … even to use the results in the papers A: Grigoriev et al (2014) MycoCosm portal: gearing up for 1000 fungal genomes. …