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Synergistic interactions between anammox and dissimilatory nitrate reducing bacteria sustains reactor performance across variable nitrogen loading ratios
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Sequencing Sphagnum Leads to Discovery of Sex Chromosomes
… Laboratory, and the HudsonAlpha Institute for Biotechnology sequenced sphagnum  genomes from plants selected by a team … and others that preferred the hollows. Those genome sequences showed not only that the sex of a sphagnum plant … tended to weather pH stress from peatlands’ acidic environment more consistently, whereas male plants showed …
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Matt Blow
… genomic technologies and to understand genome function in bacteria. … al. 2024. scMicrobe PTA: Near Complete Genomes from Single Bacterial Cells bioRxiv , 2024.01. 30.577819 2. Dicenzo et … Release Plant-Available Phosphate from Phytate. Appl Environ Microbiol 85(18):e01210-19 Price et al 2018. Mutant …
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Metabolic Network Analysis and Metatranscriptomics Reveal Auxotrophies and Nutrient Sources of the Cosmopolitan Freshwater Microbial Lineage acI
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Dominant nitrogen metabolisms of a warm, seasonally anoxic freshwater ecosystem revealed using genome resolved metatranscriptomics
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JGI Part of Berkeley Lab Team Awarded Best Use of HPC in Life Sciences
… assembler that supports “an unprecedented assembly of environmental microbiomes.” JGI’s Chief Informatics Officer  … forward and to assemble, for the first time these large environmental  microbial data sets for JGI users, which include … impacts, carbon cycling, and the microbial dynamics in freshwater lakes over a several year period.” “We’ve been …
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JGI announces first round of 2023 New Investigator awardees
… our tools with a widening circle of researchers. That’s why twice each year we look for novel research projects — … of DOE missions related to clean energy generation and environmental characterization and cleanup. The JGI provides …
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Hiroshi Otani
… is particularly interested in understanding how, when and why microbes decide to produce which metabolites. … DW, Doering DT, Mouncey NJ. Cytochromes P450 involved in bacterial RiPP biosyntheses. J Ind Microbiol Biotechnol. …
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Webinar: MycoCosm Tutorial
… JGI’s  MycoCosm data portal , an interactive collection of sequenced fungal genomes, omics data and comparative … ) on PhycoCosm tree with several sequenced genomes. 2.  Q: How exactly EcoGroups are built? … or PhycoCosm. At the moment there is no DOE mandate to sequence more Amoebozoa, but we are open to a dialogue about …
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Virulence of banana wilt-causing fungal pathogen Fusarium oxysporum tropical race 4 is mediated by nitric oxide biosynthesis and accessory genes
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Differences in sequencing technologies improve the retrieval of anammox bacterial genome from metagenomes
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Seven genome sequences of bacterial, environmental isolates from Pony Lake, Antarctica.
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