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Sensitivity Analysis of Genome-Scale Metabolic Flux Prediction
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Salt supplementation-induced metabolic reprogramming in Streptomyces coelicolor
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Position-Specific Metabolic Probing and Metagenomics of Microbial Communities Reveal Conserved Central Carbon Metabolic Network Activities at High Temperatures
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JGI Workshop at SIMB NP Meeting
… logics to be understood, accessing these untapped metabolic capabilities is often tedious and resource intensive. This is often due to, for example, tight regulation of biosynthetic gene clusters … expressing a given BGC in various hosts, availability of sequenced genomes, and computing resources needed to predict …
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Introduction: Sequences and consequences
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Targeted single‐cell sequencing
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JGIota: Sequencing Shiitakes with David Hibbett
… David Hibbett of Clark University fills us in on the kind of decay that makes shiitake mushrooms special. This week, …
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CSP Functional Genomics
… The CSP Functional Genomics call is to enable users to perform state-of-the-art functional genomics research and to help them translate genomic information into biological function.  The emphasis is on … All proposals will be externally peer-reviewed for scientific merit, DOE mission relevance , proposed data …
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JGI announces first round of 2023 New Investigator awardees
… is eager to work and share our tools with a widening circle of researchers. The JGI is eager to work and share our tools with a widening circle of researchers. That’s why twice each year we look for novel research projects — aligned with DOE missions and … address some of the most pressing challenges of our time. For more information, please visit  …
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Genomics, Exometabolomics, and Metabolic Probing Reveal Conserved Proteolytic Metabolism of Thermoflexus hugenholtzii and Three Candidate Species From China and Japan
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Doubling Down on Known Protein Families
… online Oct. 11, 2023 in  Nature highlights the vast array of functional diversity of microbes through a novel approach … unique makeup of microbe players and the functions they perform, artificially replicating a whole community is … the process hinges on referencing to existing genome sequences.  Some of these proteins are what the scientists …
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Decrypting bacterial polyphenol metabolism in an anoxic wetland soil
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