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Eight genome sequences of bacterial, environmental isolates from Canada Glacier, Antarctica
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Eight genome sequences of bacterial environmental isolates from Marr Pond, Antarctica
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Ancient Algae Reveal Secrets of Plant Evolution
… built upon an ancient genetic framework to thrive outside aquatic environments. The Impact A deeper understanding of … Berkeley National Laboratory (Berkeley Lab), scientists sequenced the genomes of four  Zygnematophyceae algae, which … plant resilience and productivity. The algal genomes sequences are available on the JGI’s  PhycoCosm portal. …
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Chromosome-scale Genome Assembly of the Most Abundant Ectomycorrhizal Fungus Cenococcum Geophilum Reveals Massive TE Expansion and RIP Defense Mechanism
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The Case for Conservation
… with a complex genome . Now, high-quality reference genome sequences of the male and female plants, each representing a … comes from finally having an answer to the question, “Why bother keeping this?” For Stuart McDaniel’s lab at the … ran the gamut of sequencing technologies, from making a bacterial artificial chromosome library to long-read …
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Supercomputing, MetaHipMer and the Mega Dataset of Lake Mendota
… before. In 2006, the JGI produced 33 billion base pairs of sequence; by 2023, that number was almost 717 trillion. Last year, the JGI surpassed three Petabases of data sequenced — that’s three-quadrillion base pairs of DNA … Lake Mendota data set, illuminating not just the highly-abundant microbes we expect to see, but also low-abundance …
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Plant Program
… manipulation in the laboratory. Both germplasm (sequenced mutants and natural accessions) and protocols …
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JGI-USCCN Strain Sequencing Opportunity
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Genome Sequence of Oceanicola sp. Strain MCTG156(1a), Isolated from a Scottish Coastal Phytoplankton Net Sample
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JGIota: The Algae Nicknamed ‘Chlamy’
… UC Berkeley plant biologist Sabeeha Merchant explains why she works on this alga, how researchers managed to sequence its genome, and what it has to teach us about other …
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Sphingomonas palmae sp. nov. and Sphingomonas gellani sp. nov., endophytically associated phyllosphere bacteria isolated from economically important crop plants
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Enlarging Windows into Understanding Gene Functions
… JGI innovates protocol revealing how genetic variations in sequences affect traits. In a text file, the rows of letters … for the absence of all the other letters of the alphabet. Yet the specific sequence of these four letters represents an organism’s …
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