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A Collaboration to Improve Plant Genome Annotations Across Species
… the JGI Plant Gene Atlas in  Nucleic Acids Research . The project spans 15 years and involves more than 17 research … of Energy (DOE) Joint Genome Institute (JGI)*, a national user facility located at Lawrence Berkeley National … of the members from the initial team contributed additional sample sets, such as sorghum internode time course data from …
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JGI-UC Merced Interns Share Their 2021 Experiences
… virtually with JGI mentors to investigate rigorous research projects, hone science presentation skills, and participate … the previous year and continue working on their research project! The JGI-UC Merced internship program was founded in … Implementing a Scalable JGI-RQC Pipeline on the Cloud …
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Expanding Horizons with the 2025 JGI-UC Merced Internship Cohort
… Interns contributed to a number of projects, from refining lab protocols at the bench to … (DOE) Joint Genome Institute, a DOE Office of Science User Facility. This year, the 12th JGI-UC Merced cohort … Brandon Imstepf一were selected to continue their research projects through the DOE RENEW grant initiative when school …
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JGI Announces 2026 Functional Genomics Recipients
… Through our CSP Functional Genomics call , we look for projects that will leverage the JGI's biodesign and omics … U.S. energy independence and secure domestic supplies of materials essential to a growing bioeconomy. The JGI is a DOE Office of Science national scientific user facility supported by the Biological and Environmental …
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Olpidium, The Key to the Origin of Terrestrial Fungi
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, found that the fungus Olpidium is a link in … habitats. The work is part of the JGI’s 1000 Fungal Genomes Project, which aims to provide genomic information for every … times in order to obtain enough zoospores. DNA and RNA samples generated from the zoospores were then sent to the …
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JGI Announces 2025 New Investigator Portfolio
… researchers) Each year, the JGI searches for novel research projects from PIs who have not led any previously accepted … these researchers will investigate a diverse array of projects, including the genomic dynamics of … for this ongoing call; the next deadline for proposal submission is Sept. 9, 2025, for inclusion in the November …
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How Microbes Can Protect Plants in Drier Straits
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You Can Move, But You Can’t Hide
… of Energy Joint Genome Institute, a DOE Office of Science User Facility at Lawrence Berkeley National Laboratory … Lab), with computing resources provided by NERSC, another user facility at Berkeley Lab. geNomad is now accessible … easy to use interface allows beginners and experienced users to import their data and access the geNomad tool to …
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Characterizing Communities: JGI Announces Latest CSP Portfolio
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science user facility, 24 large-scale proposals have been accepted … for the accepted proposals, said Susannah Tringe, JGI User Programs Deputy. “These new CSP projects accelerate our efforts to characterize …
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JGI@25: Fueling Investigation into Methane-Making Microbes
… Hungate1000, a catalog of 410 rumen microbe genomes. The project relied upon resources from laboratories around the … research offshoots in totally different areas, beyond the project’s initial scope. Sequencing and culturing this vast … provide colleagues at the Salk Institute with genomic DNA samples from Ruminococcus flavefaciens (XPD3002). With that …
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Understanding Wildfire Recovery, Starting in Soil
… a multi-institutional team of researchers collected soil samples from a wildfire that burned at the Colorado-Wyoming … Institute (JGI). EMSL and the JGI are DOE Office of Science User Facilities located at Pacific Northwest National … DOE Office of Science National User Facilities in a single project. …
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JGI Announces 2026 New Investigator Portfolio
… N. Zepernick.    Each year, the JGI solicits novel research projects from PIs who have not led any previously accepted … for this ongoing call; the next deadline for proposal submission is Sept. 8, 2026, for inclusion in the October …
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