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Events
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Complete Genome Sequence for Asinibacterium sp. Strain OR53 and Draft Genome Sequence for Asinibacterium sp. Strain OR43, Two Bacteria Tolerant to Uranium
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Nitrosococcus watsonii sp. nov., a new species of marine obligate ammonia‐oxidizing bacteria that is not omnipresent in the world's oceans: calls to validate the names ‘Nitrosococcus halophilus’ and ‘Nitrosomonas mobilis’
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Frederik Schulz
… Group. His research is focussed on the discovery of novel bacterial, archaeal and eukaryotic microbes and viruses in … to the JGI user community and supports various user projects in the Microbial Program. In an LDRD-funded project, Dr. Schulz established a single-cell-based …
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Forming Scientific Connections and Building Community
… and also made new friends while working on their summer projects. Watch the short video here to see what they had to … below are the interns, their mentors, and their summer projects. Each intern also mentioned what they loved about … “ Exploring the epigenetic basis of pathogenicity in bacteria” Erika Maquiling : “Being a JGI intern means going …
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SPRUCE-ing Up Science
… (JGI)-UC Merced internship program, Lawrence is now a postdoctoral researcher at the Oak Ridge National Laboratory … Duke University, published their research related to how bacteria that colonize the roots of sphagnum work to … . “There was a lot of freedom to explore,” he recalled. His project involved developing an algorithm and although the …
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Engagement Webinar: How to Successfully Apply for a CSP Proposal
… What are the pros and cons of proposing a truly exploratory small proposal that might not max out the whole 500 … to reach that maximum with broader questions and broader project scope? A: Focus on strong science and well-thought-out questions. We are looking for projects that can’t easily be done at a core facility, but …
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A Pinch of Salt Activates Silent Gene Clusters in Streptomyces
… to examine microbial chemical production. The Science Soil bacteria in the genus Streptomyces are nature's chemical … dozens of growth conditions and found that adding a small amount of common salt to the Streptomyces coelicolor …
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Identifying the Microbial Cleanup Crew at a Superfund Site
… from a local dry-cleaner. Researchers  identified two bacteria,  Dehalococcoides mccartyi and  Dehalobacter … sequencing and analysis, the researchers identified other bacteria and microbial processes that support PCE … to analyze the resulting metagenomic data. (Data from the project are available on the  JGI Genome Portal .) The team …
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Jeremy Schmutz
… 5, 16, and 19. Following the completion of the Human Genome Project in 2003, he developed sequencing, assembly, and … DOE relevant cellulosic feedstocks. He provides scientific project management for the reference eukaryotic genomes … sequencing, he manages the de novo plant assembly and the post-genome computational analysis at HudsonAlpha. …
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GenomeOcean Leverages AI to Decode Nature’s Secret Language
… Berkeley National Laboratory (Berkeley Lab), led the project. He explained that large language models—artificial … environments, the long-term ecological Harvard Forest project, large datasets from soil microbiome studies … 4 billion parameters is not a task that can be handled by a small computer cluster. GenomeOcean was trained on a …
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A Natural Mechanism Can Turbocharge Viral Evolution
… that discovery, DGRs have been found in other viruses, bacteria, and archaea. But how widely distributed they are, … (DP150100244) and the Australian Antarctic Science program (project 4031). The work in the Hallam Lab was performed … V.I.R. and S.R.S. acknowledge support for the IsoGenie Project (samples and metadata from Stordalen Mire, Sweden) …
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