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Identifying the Microbial Cleanup Crew at a Superfund Site
… a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory and used to identify the microbes involved in … Science Program , they were able to analyze the resulting metagenomic data. (Data from the project are available on the  …
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New Research Finds Flagella in the Terrestrial Roots of Marine Bacteria
… that enable organisms to swim around. However, genome and metagenomic sequencing conducted by the U.S. Department of … a DOE Office of Science User Facility at Lawrence Berkeley National Laboratory, has unveiled these motility tools in hot spring  …
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David Goodstein
… analysis and data distribution for the JGI's direct collaborators and the wider plant science community. Dr. … in Physics, Cornell University, NY … RJ Craig et al., 2023.The Chlamydomonas Genome Project, version 6: Reference … minus strains reveal extensive structural mutation in the laboratory. The Plant Cell 35 (2), 644-672 A Sreedasyam et …
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JGI@25: Following Fungi that Pry Apart Plant Polymers
… a number of notable achievements that showcase our collaborations and capabilities to enable great science that … be produced by microorganisms — out,” said JGI user/collaborator Michelle O’Malley, a chemical and biological … genomics and transcriptomics to discover another advantage these fungi wield: the capacity to form enzyme …
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Sequencing Sphagnum Leads to Discovery of Sex Chromosomes
… a DOE Office of Science User Facility at Lawrence Berkeley National Laboratory, and the HudsonAlpha Institute for Biotechnology … protecting these ecosystems. … The work (proposal no. 10.46936/10.25585/60001030) (A.J.S.) conducted by the US …
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Understanding Wildfire Recovery, Starting in Soil
A metagenomic look at the soil microbes present a year after a … State University, the Environmental Molecular Sciences Laboratory and the U.S. Department of Energy (DOE) Joint … at Pacific Northwest National Laboratory and Lawrence Berkeley National Laboratory, respectively. The team’s …
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JGI@25: Studying Sorghum’s Survival Skills
… a number of notable achievements that showcase our collaborations and capabilities to enable great science that … reference genome for Sorghum bicolor . Since then, 2,993 publications, 107 patent applications, and 53 patents have … Tolerance in Sorghum (EPICON) begins. Peggy Lemaux (UC Berkeley) and her team studied sorghum plants in drought …
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Bacteria and Fungi Divvy Up the Work in Forest Floor
… researchers have found that there is a striking division of labor between the two groups. Fungi are much more active in … to identify proteins, the team compiled DNA sequences (metagenomes) and messenger RNA sequences (transcriptomes) from … a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory, to create the database. JGI …
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Forming Scientific Connections and Building Community
… research is very sentimental to me.” Mentors: Crysten Blaby-Haas & Bikash Shrestha Project: “ Detecting Isotope … a part of a dynamic and innovative environment where collaboration and research discovery are at the forefront.” Mentors: Rex Malmstrom, Nandita Nath & W. Berkeley Kauffman Project: “ 16s Sequencing of Barcoded …
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Eelgrass Proves to Be Much Younger Than We Thought
… its history. Their research, published in  August 2023 in  Nature Plants , was able to assess absolute time … a DOE Office of Science User Facility at Lawrence Berkeley National Laboratory, provided sequence resources — including the …
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Fungus Fuels Tree Growth
Center for Bioenergy Innovation (CBI) at Oak Ridge National Laboratory. To see how the fungus affected poplar growth, … and without an inoculation of the  M. elongata strain PM193 added to a diluted soil mixture, publishing  the results … Plant-Microbe Interfaces program at the Oak Ridge National Laboratory (ORNL) sponsored by the Office of Biological and …
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Expanding Virophage Diversity
… approaches. By mining more than 14,000 publicly available metagenomic datasets in JGI’s  Integrated Microbial … a DOE Office of Science User Facility  located at Lawrence Berkeley National Laboratory, is committed to advancing …
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