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Supercharging SIP in the Fungal Hyphosphere
… have successfully automated aspects of a commonly-used process for studying microbial communities, with … DNA of specific microbes who consume the labeled food or water. Later, their DNA can be tested for the isotope, which … after incubating microbial communities with labeled food or water, the microbial DNA is manually separated into a few …
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A large sequenced mutant library – valuable reverse genetic resource that covers 98% of sorghum genes
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Vertical and horizontal gene transfer shaped plant colonization and biomass degradation in the fungal genus Armillaria
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FICUS Overview
The Facilities Integrating Collaborations for User Science (FICUS) initiative was established in 2014 to … of multiple Department of Energy Office of Science National User Facilities into their research. In recognition of the … couldn’t with projects undertaken separately at individual user facilities. A Letter of Intent is required. For …
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
Plants provide photosynthesized carbon, while fungi deliver water and nutrients. In order to do so, these organisms … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … This team quantified the expression of over 12,000 fungal genes, in addition to associated plant genes.  Hear more …
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
Plants provide photosynthesized carbon, while fungi deliver water and nutrients. In order to do so, these organisms … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … This team quantified the expression of over 12,000 fungal genes, in addition to associated plant genes.  All together, …
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Symbiotic Burkholderia Species Show Diverse Arrangements of nif/fix and nod Genes and Lack Typical High-Affinity Cytochrome cbb3 Oxidase Genes.
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A One-Stop Shop for Analyzing Algal Genomes
… data portal allows anyone to freely investigate the genes of more than 100 algae. The Science Interested in the … genomic data on algae into one place, PhycoCosm allows users to easily compile data that answers what genes are present in which organisms, when are they …
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The ectomycorrhizal fungus Paxillus involutus converts organic matter in plant litter using a trimmed brown‐rot mechanism involving Fenton chemistry
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Picking Up Threads of Cotton Genomics
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … cottons, along with noted key fiber development genes. The results indicate remarkably high overall sequence … analysis of the five cotton genomes identified unique genes related to fiber and seed traits in the domesticated  …
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2024 Progress Report
Mission  As a U.S. Department of Energy Office of Science user facility, we provide advanced genomic capabilities, … in April 2024 — through serving an increased number of users with a record output of products, making data easier to access and use, and by investing in the latest advanced genomic …
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Investigation of recombination-intense viral groups and their genes in the Earth’s virome
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