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Natural Prodcast Episode 17: Cassandra Quave
… week is Professor Cassandra Quave from Emory University, with joint appointments in the School of Medicine and … whether it’s for plants to make clothing, or musical instruments, or food, or medicine, which was really where my … plant natural products is rife with really poorly designed studies. We have studies where people write about work on …
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What Happens Underground Influences Global Nutrient Cycles
… features prominently among the eleven proposals selected with four focused on biofuels and bioproducts. For example, … on an aspect of the  Phenotypic Response of the Soil Microbiome to Environmental Perturbations   under PNNL’s … expected to be expert users on all of the scientific instruments. Instead, members of the scientific staff from both …
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Transcription Factor Family-Based Reconstruction of Singleton Regulons and Study of the Crp/Fnr, ArsR, and GntR Families in Desulfovibrionales Genomes
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Multiple Maize Reference Genomes Impact the Identification of Variants by Genome‐Wide Association Study in a Diverse Inbred Panel
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Russulaceae: a new genomic dataset to study ecosystem function and evolutionary diversification of ectomycorrhizal fungi with their tree associates
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PCR and Omics Based Techniques to Study the Diversity, Ecology and Biology of Anaerobic Fungi: Insights, Challenges and Opportunities
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Applying Viral Genomics Expertise to Understanding the Human Virome
… at Lawrence Berkeley National Laboratory, have collaborated with global researchers on projects related to understanding … Human Virome Program .  Nikos Kyrpides , head of the JGI’s  Microbiome Data Science , leads one project with JGI … classifying viruses into groups that can be compared across studies, (ii) predicting which hosts these viruses are …
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Systematic Identification of Gene Families for Use as “Markers” for Phylogenetic and Phylogeny-Driven Ecological Studies of Bacteria and Archaea and Their Major Subgroups
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Targeted and shotgun metagenomic approaches provide different descriptions of dryland soil microbial communities in a manipulated field study
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Global Diversity of the Brachypodium Species Complex as a Resource for Genome-Wide Association Studies Demonstrated for Agronomic Traits in Response to Climate
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Genome-Wide Association Studies across Environmental and Genetic Contexts Reveal Complex Genetic Architecture of Symbiotic Extended Phenotypes
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Kjiersten Fagnan
Kjiersten Fagnan began working with JGI in 2012 as a NERSC bioinformatics computing … In 2014 Dr. Fagnan became the JGI-NERSC Engagement Lead with a focus on adapting JGI workloads to run on … management. Dr. Fagnan is also a co-PI for the National Microbiome Data Collaborative where she leads infrastructure …
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