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JGI@25: The Human Genome Project, or the JGI’s Origin Story
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our … was being waged. In the JGI@25 video below, Susan Lucas, former JGI Production Department Head and current ESnet … with the HudsonAlpha Institute for Biotechnology.   Publications Grimwood, J., Gordon, L., Olsen, A. et al. The …
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Atif Shahab
… Since 2012, Mr. Shahab has led the development of an integrated platform for tracking JGI's sequencing projects and data warehousing. This platform streamlines project management, laboratory … BS in Electrical Engineering, University of New South Wales, Australia; MS in …
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Mindfully Moving JGI
… JGI is in the process of shifting its operations from Walnut … Walnut Creek, after countless generations of sequencing platforms (up to 120 sequencing machines at maximum) maintained … waste that would actually go to the landfill. Sorting required multiple speedpaks – large boxes with nearly a …
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JGI Pitches 2022 Visiting Faculty Program Collaborations
…   On November 3, 2021, the JGI and the Workforce Development & Education department of Lawrence Berkeley … through the U.S. Department of Energy (DOE)’s Visiting Faculty Program (VFP) . The VFP is a summer …
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Simon Roux
… viral genomics research as part of the Metagenome Program. His responsibilities include the development of novel computational tools to identify virus … link viruses to their host(s), collaboration with JGI users for analyzing viral datasets, and the organization of …
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JGI Scientists Pen Genome Watch Articles
… Woyke and other JGI researchers made their debut writing for the Nature Reviews Microbiology column last year — and … Berkeley National Laboratory, are sharing their expertise in environmental genomics by writing for the column … in research area, gender, as well as stage of professional development. “There are a lot of really great early career …
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The Expanding Universe of Methane Metabolisms in Archaea
… Metagenome-assembled archaeal genomes provide new insights into an ancient metabolism. Methane is a greenhouse gas 20 times more potent than … of the Earth’s atmosphere and regulating the global climate for life to flourish. For Guillaume Borrel and Simonetta …
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Natural Prodcast Episode 1: The Primer, Part 1
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … Takemura, whose voice you’ll hear in a minute – we work for the US Department of Energy Joint Genome Institute, or … Episode Transcript … This is the first episode of Natural Prodcast, a podcast …
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“A STEM career is in reach and accessible”
… Notes from the Summer 2018 Biotech Partners Interns from Antioch High School. Though a partnership with … in the Bay Area with personal, academic and professional development experiences that increase participation in … JGI hosted five students from Antioch High School this summer. …
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Crysten Blaby-Haas
… and knowledge-based user facility at Berkeley Lab. She is spearheading the development of a joint user capability between the JGI and Molecular Foundry for genome-encoded biomaterial discovery, design, and … Botany, 2022 – present University of Florida MCS Advisory Council, 2022 – present Alumni Award, MCS, University …
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Four principles to establish a universal virus taxonomy
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Simon Roux Named 2025 ASM Microbiome Data Prize Awardee
… of Energy (DOE) Joint Genome Institute (JGI) staff scientist Simon Roux , who was recently selected as the 2025 … of the Microbiome Data Prize by the American Society for Microbiology (ASM). Roux leads the Viral Genomics group … within the JGI Metagenome Program, and coordinates the development of the virus and plasmid workflows for the …
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