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A One-Stop Shop for Analyzing Algal Genomes
… The PhycoCosm data portal allows anyone to freely investigate the genes of more than 100 algae. The Science Interested in the genomes of algae? You now have one place where you can browse the genetic blueprints of …
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JGI Early Career Researchers Featured in mSystems Special Issue
… what the next five years of innovation could look like. In one article, Micro-Scale Applications head Rex Malmstrom and Metagenome Program head Emiley Eloe-Fadrosh outline more … metagenomics. One approach uses fluorescence-activated cell sorting (FACS) to sort cells into several small pools …
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Biotech Partners Summer Intern Co-Authors NAR Paper
… Kaushal Sharma, one of five Antioch High School rising juniors who participated in internships at the DOE Joint Genome Institute this summer through the Biotech Partners … program is now an author on a Nucleic Acids Research publication. The paper describes the version 6 data updates …
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New and Improved: Eucalyptus Reference is Now Accessible
… An improved genome assembly to support targeted tree breeding for the … meaning the genome is reconstructed in much larger and more complete segments. This allows for more accurate and … generated using advanced technologies to reconstruct the complete sequences of individual chromosomes. The team …
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The More the Merrier: Making the Case for Plant Pan-genomes
… Brachypodium model system traces polyploid genome evolution. Flowering plants abide by the concept, … their base state, they are diploids with two genome copies, one from each parent. Having three or more genome copies … the diploid progenitors of other polyploid plants have gone extinct or are unknown),” noted Pilar Catalan of the …
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A Better Way to Find RNA Virus Needles in the Proverbial Database Haystacks
… page of that book. Published online September 28, 2022, in Cell , a team led by researchers at Tel Aviv University in … Information, and the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … said Eugene Koonin, a senior investigator at the NCBI and one of the senior authors on the paper, of the uncovered …
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Tracking the Origins of Methane-Producing Microbes
… on the global carbon cycle. All methanogenic archaea use one of three pathways for methanogenesis: hydrogen-dependent … these samples by sorting the microbes into small pools of cells that were then sequenced separately. From these … metabolisms, they found that one of the MAGs contained the complete set of genes needed for hydrogen-dependent and …
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High-resolution genetic mapping of allelic variants associated with cell wall chemistry in Populus
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Advancements in the application of NanoSIMS and Raman microspectroscopy to investigate the activity of microbial cells in soils
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Tracking heavy water (D2O) incorporation for identifying and sorting active microbial cells
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Exometabolomics and MSI: deconstructing how cells interact to transform their small molecule environment
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Mobile MUTE specifies subsidiary cells to build physiologically improved grass stomata
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