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Metagenomic and metaproteomic insights into bacterial communities in leaf-cutter ant fungus gardens
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Metagenomic analysis of a permafrost microbial community reveals a rapid response to thaw
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Long-read metagenomics of soil communities reveals phylum-specific secondary metabolite dynamics
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Gene Expression: From On-Off Switch to Dial
… researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … area in the DNA, to determine which targets might benefit from an intermediate level of expression. Similar to the … User Facility, is supported under Contract No. DE-AC02-05CH11231. …
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Enriching public descriptions of marine phages using the Genomic Standards Consortium MIGS standard
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New Biological Insights Into How Deforestation in Amazonia Affects Soil Microbial Communities Using Metagenomics and Metagenome-Assembled Genomes
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Metagenomes, Metatranscriptomes, and Metagenome-Assembled Genomes from Chesapeake and Delaware Bay (USA) Water Samples
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Calculating the Costs of Multiple Switchgrass Gene Copies
… and the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … guest piece, postdoctoral researcher Joseph Napier from the Juenger lab and computational biologist Paul … in 4X switchgrass, we were surprised by the number of 8X individuals that had been collected from field work. When …
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Igor Grigoriev
Dr. Grigoriev joined the DOE Joint Genome Institute in 2003, following his postdoctoral … led annotation and analysis of diverse eukaryotic genomes, from protists to plants. In 2009, he launched the JGI Fungal … … Fungal & Algal Science Program … Education … Selected Publications … Awards and Service …
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Picking Up Threads of Cotton Genomics
Analysis reveals cotton genome stability across global lineages . Come harvest time, … Science “The results described in this  Nature Genetics publication will facilitate deeper understanding of cotton … the textile industry, and consumers will derive benefit from this high impact science for years to come,” said Don …
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The Megadata of Lake Mendota - Part 2: Souped Up Computing
This series is the story of a giant metagenome assembly from Wisconsin’s Lake Mendota. In this episode: a look at …
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JGI@25: Expanding Metagenomics to Capture Viral Diversity
… host to replicate. Sequencing genetic material directly from samples sidesteps these challenges, since it doesn’t … Beginning in the early 2000s , these environmental metagenomes began to offer a window into viral existence. Along … of this bacteria — most likely there is a virus that is already doing what you want in a sense, and can inform on how …
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