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An Automated Tool for Assessing Virus Data Quality
… have now developed CheckV (pronounced “Check-Vee”) to help researchers assess and improve the quality of metagenome-assembled viral genomes . … Environmental DNA sequencing can help scientist to recover the genomes of these viruses and associate them …
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Making a Lichen Together
For the first time, a team analyzes the transcriptomes of a lichen fungus and alga to understand their partnership more clearly. The Science … revive in mere seconds or minutes — a trait that could help improve crop drought resilience. It’s a superpower even …
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Taking Stock of the Known and Unknown Microbial Space
… decades, advancements in sequencing technologies have led to an abundance of microbial genomes becoming available to the global research community.  Published January 17, … datasets used in this study could help researchers improve their chances of recovering specific isolate species …
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Dealing with Drought: Uncovering Sorghum’s Secrets
Over 40 percent of the cereal crop’s genes respond to drought stress. The Science Fields of drooping stalks and … earth are becoming common images in many regions due to more extreme weather events such as heat waves, droughts … with adverse environmental conditions, researchers hope to improve yields for other crops under water-limited …
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Busting the Unbreakable Lignin
… components   The Science There are three main ingredients to tackle when it comes to breaking down a plant for energy: Cellulose, … that eventually yield fuels, and removing lignin in order to do so is a resource-intensive process. Now, a new study …
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Calculating the Costs of Multiple Switchgrass Gene Copies
Scientists have discovered that the candidate bioenergy feedstock switchgrass has adapted to expand its habitat range. But at what cost?  A … in providing genetic variation available for selection to improve biofuel yield through a changing future. Switchgrass …
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Uncovering Novel Genomes from Earth’s Microbiomes
Large-scale comparative analysis leads to identification of biosynthetic gene clusters for novel … Because most microbes cannot be cultivated under laboratory conditions, their genomes can’t be sequenced using … microbes.” Teams of researchers worked on multiple analyses harnessing the genome repository, and the IMG/M team …
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Integrating Experimentation with Data
… (JGI) and the Environmental Molecular Sciences Laboratory (EMSL) for “Empowering Automated Laboratories: Integrating Experimentation with Data.” The event …
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2025 NeLLi Symposium
Research Institute, the 2025 NeLLi Symposium delves into the most recent expansions of the Tree of Life and latest discoveries toward the evolution of cellular complexity and microbial … cycles and beyond, as well as microbial symbioses. We aim to foster discussions centered on how to capture, define, …
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JGI Workshop at SIMB NP Meeting
Jan. 7: New Capabilities to Study Secondary Metabolism   Although there are still a large number of secondary metabolites yet to be discovered and their biosynthetic logics to be understood, accessing these untapped metabolic …
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Scaling Up Existing Skill Sets
… in fields ranging from plant-microbe interactions to functional genomics. Hear from five of the Summer 2019 … 4th year PhD student in Quantitative and Systems Biology Mentor: Guohong Wu, Plant Comparative Analysis What effect has your summer internship with the JGI had on your plans to pursue a STEM career?
 Doing the JGI internship has given …
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JGI Launches Latest Strategic Plan
… “petabase” – a quadrillion nucleotide bases of DNA sequence to the public data repositories over its now 20-plus-year history. In 2019, the countdown has begun to the June …
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