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In Hot Spring Microbial Mat, Viruses Ride “Piggyback”
… first time, a team has comprehensively described host-virus dynamics in a microbial mat. The Science In microbial mats, … metabolism affects the biogeochemical cycling of carbon, nitrogen, and other elements, better understanding the …
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How to Target a Microbial Needle within a Community Haystack
A workflow for capturing the genetic make-up of specific uncultivated microbes … samples. The Science A team led by researchers at the Max Planck Institute (MPI) for Marine Microbiology has developed, … pools before being subjected to genome sequencing. Various fixation protocols were also tested as part of the method …
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2022 Progress Report
Pictured is a timelapse of the Integrative Genomics Building (IGB) seen above is … (KBase), the National Microbiome Data Collaborative (NMDC), and Berkeley Lab Biosciences Area are also co-located in the …
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Model Fern Reveals Insight into DNA Thievery in Ferns
… with C. richardii The Science Fern genomes are huge, and incredibly complex — making it difficult to grasp a … findings in Ceratopteris richardii show a long history of dynamic evolution and rapid changes in both genome content …
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Supercharging SIP in the Fungal Hyphosphere
High-throughput stable isotope probing helps ID novel interactions between bacteria and fungi The Science Researchers have successfully … — highlighting the hyphosphere as an even more complex and dynamic environment. By further streamlining the process for …
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Natural Prodcast Episode 17: Cassandra Quave
… … Dan Udwary: Hey everybody! Welcome back for Natural Prodcast … is Professor Cassandra Quave from Emory University, with joint appointments in the School of Medicine and College of … I think on COVID that we’re getting ready to submit for publication and have found some interesting hits for that as …
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A Community Resource for Secondary Metabolite Researchers
Collaboratory encourages user engagement. The Science In addition to the core set of "primary … shared by most living creatures for energy, growth and reproduction—most organisms produce a set of "secondary … more than 13 million BGCs in the catalog at the time of publication, it is the largest repository of BGC sequence …
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Nigel Mouncey
Dr. Mouncey joined the DOE Joint Genome Institute in 2017 as the fourth Director in its 27-year history. He has a wealth of managerial experience from almost 20 years in the Industrial … World Bio Markets Bio-based Business Person of the Year Publications Committee Chair (2016- ), Society for …
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Finding the Fermenters
Harnessing BER-funded data resources, researchers built an interactive and comprehensive database of fermentative … phenotype and genotype of fermentative prokaryotes on IMG … Publication … Datasets … Datasets … Datasets …
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Data Ecosystem
To expand access to integrated data, improve tools and infrastructure as well as ensure cohesive data standards, the JGI partners with a number of facilities.  … Through its partnership with NERSC and the …
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Forming Scientific Connections and Building Community
The 11th cohort of JGI-UC Merced interns pick highlights from their summer experiences. This … of Science User Facility, hosted three undergraduates and seven graduate students from UC Merced through their … Calderon : “Being a JGI intern means being a part of a dynamic and innovative environment where collaboration and …
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New Research Sheds Light on Diversity in the Deep Sea
Microbial communities living near hydrothermal deep-sea vents hold vast potential for bioenergy.   The Science Hydrothermal vents are ocean-floor openings in the Earth’s crust that emit hot, … shared a high prevalence of genes involved in sulfur and nitrogen metabolism, as well as those that play a role in …
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