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JGI@25: The Little Alga That Could
… to those who study it) a powerful reference organism for studying photosynthesis and cell motility. It’s also a … sustainable biofuel production. The JGI published a partial sequence of Chlamydomonas reinhardtii in 2003; then in 2007 … JGI’s early sequencing of C. reinhardtii became available, data mined by the JGI shows that those sequences have been …
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High-Quality Draft Nuclear and Mitochondrial Genome Sequence of Fusarium oxysporum f. sp. albedinis strain 9, the Causal Agent of Bayoud Disease on Date Palm.
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From Intern to Published Scientist: The Journey of a JGI-UC Merced Intern
… For many scientists, the culmination of their work into a … ecosystem,” said Salamov, one of Wint’s mentors and a data scientist at the JGI. Previous studies were conducted … applications, Wint also developed and tested a gene sequence-based predictor of gene expression levels using …
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A Model System for Perennial Grasses
… U.S. Department of Energy (DOE) supports research programs for developing methods for converting plant biomass into sustainable fuels for cars … Through the JGI’s Community Science Program , JGI sequenced and assembled near-complete genomes of P. hallii … Johnson Wildflower Center provided support and field sites for experiments. This work was funded by NSF/IOS-1402393 …
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A One-Stop Shop for Analyzing Algal Genomes
… The PhycoCosm data portal allows anyone to freely investigate the genes of … Understanding the genetic underpinnings responsible for these traits takes us closer to harnessing algae for … algal genomes can be incredibly complex and difficult to sequence and understand. A team of researchers led by Algal …
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Forming Scientific Connections and Building Community
… months, the students participated in networking workshops, data carpentry hackathons, and also made new friends while … experiences and what they’ll take with them as they go forward in their careers.   Listed below are the interns, … “ Development of a multiplex genomic integration system for the selection of genes essential for specialized carbon …
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Mining Metagenomes for Cas Proteins
… Cas14 proteins discovered from JGI’s IMG/M database and biochemically characterized at UC Berkeley and … Institute (JGI), a DOE Office of Science User Facility. The sequences were then biochemically characterized by a team … led by Jennifer Doudna’s group at the University of California (UC), Berkeley, which is also affiliated with …
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Steven Wilson
… Systems Engineering Group lead.   The group is responsible for developing and supporting applications that span the … project and work order creation and management, automated sequence quality control and automation of microbial/metagenomic assemblies, portals that make data available to the public, and our institutional website. …
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Frederik Schulz
… and eukaryotic microbes and viruses in environmental sequence data. Dr. Schulz employs multi-omics (metagenomics, … discovery pipeline and enrichment metagenomics for terrestrial protists. These approaches enable novel … of Vienna (Austria) PhD Microbial Ecology and Bioinformatics, University of Vienna (Austria) …
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Draft Genome Sequence of the Ectomycorrhizal Ascomycete Sphaerosporella brunnea
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Genome Sequences of Actinobacteria from Extreme Environments in Colombia
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Functionally conserved enhancers with divergent sequences in distant vertebrates
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