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JGI@25: Cow Rumen and the Early Days of Metagenomics
… In honor of the JGI's 25th anniversary in 2022, we have revisited a … of the cow stomach. Rumen – and its microbes – are really a powerhouse. Rumen microbes have the ability to break down … the same on an industrial scale to produce biofuels . Since one of the challenges of developing alternative fuels from …
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A Shrubbier Version of Rubber
… Right now, our natural rubber comes from just one tree species: Hevea brasiliensis . It’s great at producing latex that becomes rubber, but it’s …
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Exploring Possibilities: 2022 JGI-UC Merced Interns
… In this short video, UC Merced undergraduate and graduate students share how their summer internship … Clement Coclet and Simon Roux Tyrome Sweet and mentor Jonelle Basso Yumary Vasquez and mentor Juan C. Villada … And also specifically, it sparked my interest in bioformatics, so that’s what I’m gonna take with me to the …
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Adopt-A-Genome
… In this episode, undergraduates adopt genomes that the JGI sequenced, but never published in the literature. … and Mark Soghomonian share what it was like to take on one of these genomes.  …
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An Age of CRAGE: Advances in Rapidly Engineering Non-model Bacteria
… have made strides in improving and applying a method that allows researchers to quickly modify diverse bacterial … ( CRAGE ). CRAGE enables scientists to insert large pieces of DNA (up to 60 kb) in a single step, directly into the … can be used to create compounds more efficiently than one strain could on its own.  In work published in  …
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JGI Earth Month: Kjiersten Fagnan Reflects on Shelter-in-Place Effects
… In   April 2020, we mark both the 50th celebration of Earth Day on April 22, and DNA Day on April 25.  On … at Lawrence Berkeley National Laboratory, is located in one of those counties. The shelter-in-place order has since … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …
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JGI-KBase Panel at SACNAS
… Nov. 2: Getting Credit for Scientific Contributions of Any Size What is considered to be a scientific contribution? This … and Programs, and introduce best practices for anyone to get credit for their contributions to science. A …
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EcoFAB 2025: Advancing Mechanistic Microbial Science Using Fabricated Ecosystems
… Register here Book your stay at the conference venue This inaugural event will bring … studies.  This conference is inspired by the vision of standardized fabricated ecosystems (EcoFABs) designed for … server, which has channels for finding roommates and carpools, contact Margie Lozano ( [email protected] ) …
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Webinar: PhycoCosm Tutorial
… Learn more about JGI’s  PhycoCosm data portal , an interactive collection of sequenced algal genomes, omics data and comparative … on, there are 7 genomes on NCBI but your portal has only 2 of them. A: Watch the video (above) for the answer provided … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …
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The JGI Data Portal: Improving User Experience
… The human-centered, agile collaboration between the JGI and the information technology company … from the other JGI Portals, as well. “For thousands of scientists around the world, the JGI Genome Portal is a … data more findable and easier to download is a complex one, so our joint team started small, in the tradition of …
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For the Tiniest Archaea, A Genomic Switch of Friend or Foe
… The Science Within the archaeal domain, there is a group of tiny hitchhikers. These organisms are abundant and yet … it to usable organic compounds. However, no microbe works alone. Archaea, bacteria, and viruses all operate in concert … genomes. One of these systems, the CRISPR-Cas9 system, is a powerful tool in gene editing, but many other systems exist. …
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From Stress to Growth: The adaptive mechanisms of algae in changing Arctic waters
… ice in the Arctic has decreased by more than 30% in terms of quantity and thickness. Replacing older, thicker ice with … there.  A  Communications Biology article highlights how one microalga collected from water on the ice surface … lives in a range of habitats — from brine pockets and melt pools, and within the water column. They are also the …
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