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Development of a Freeze-Dried CRISPR-Cas12 Sensor for Detecting Wolbachia in the Secondary Science Classroom
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An Age of CRAGE: Advances in Rapidly Engineering Non-model Bacteria
… A group led by JGI scientists have made strides in improving and applying a … single step, directly into the genome. “CRAGE is central to our ability to offer host-engineering for our users,” says … select group of bacterial strains as part of the Community Science Program (CSP)  Functional Genomics proposal call. …
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Mike Sneddon
… Dr. Sneddon is the Advanced Analysis Group Lead in the Data Science and Informatics Department at the Joint Genome Institute. His team of engineers and scientists builds and operates the data and compute … and bioinformatics annotation pipelines that support JGI’s portals, tools, and the DOE’s emerging AI-enabled …
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Scaling High‐Resolution Soil Organic Matter Composition to Improve Predictions of Potential Soil Respiration Across the Continental United States
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2022 Progress Report
… (IGB) seen above is home to the DOE Joint Genome Institute (JGI). Researchers from the DOE Systems Biology Knowledgebase (KBase), the National Microbiome Data Collaborative (NMDC), and Berkeley Lab Biosciences Area are also co-located in the IGB. Vision The …
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Ancient Algae Reveal Secrets of Plant Evolution
… helped plants conquer land over 600 million years ago. The Science By studying the genes of land plants’ closest algal relative,  Zygnematophyceae , scientists have enhanced our understanding of how early plants transitioned from … This work was funded by the US National Science Foundation (NSF) CAREER award (DBI-1652164, …
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How Maize Makes An Antibiotic Cocktail
… it against infections — using surprisingly few enzymes. The Science Maize ( Zea mays ) produces a plethora of antibiotics called zealexins. Even though scientists have identified at least 15 zealexins, they … buck. The research team reports that transferring just four genes encoding these enzymes to another plant, such as  …
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Engagement Webinar: Harnessing JGI’s Metabolomics Capabilities
… The JGI Engagement Webinar held November 5, 2020 (watch the  … analysis capability available through the  Community Science Program (CSP) . This includes mass … anywhere around the world can apply to access the JGI’s resources. Q:  Where can I get information for funding by JGI? …
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Sequencing crop genomes: approaches and applications
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The Power of One, Amplified
… single cell genomics complements metagenomics studies. The Science Researchers demonstrated the value of conducting … genomes then amplified and sequenced individually, offering scientists the opportunity to apply population genomics … microbial populations. The work appeared in The ISME Journal . Members of the Dunfield lab collected samples from …
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Ten Pressing Questions (and Answers) About Marine Fungi and Opportunities for Collaborations in the Ocean Sciences
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A Complex Confection Decoded: Sugarcane Reference Genome
… can work toward advancing sugarcane biotechnology. The Science Considered the world’s most harvested crop by … The Impact In providing a reference sugarcane  genome , the JGI provides foundational genetic information that crop … cultivar R570 has been generated and  reported in the journal  Nature . The work led by researchers at Australia’s …
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