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Genome sequences of four novel Endozoicomonas strains associated with a tropical octocoral in a long-term aquarium facility.
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New Vision, New Mission, New Plan: The JGI’s Next Five Years
… global research community. The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) has released its newest … and stimulate a bioeconomy, where renewable, biological resources drive processes, products, and services.  Advancing … expertise while responsibly managing people and resources. “The plan looks toward exciting new directions in …
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Feed Your Friends: Do Plant Exudates Shape the Root Microbiome?
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Simon Roux Named 2025 ASM Microbiome Data Prize Awardee
Congratulations to US Department of Energy (DOE) Joint Genome Institute (JGI) staff scientist Simon Roux … and impactful analysis of microbiome data that has changed our understanding of the microbiome and the microbial … diversity.  In 2021, he was among those selected by the DOE Office of Science as part of the Early Career Research …
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Integrating Experimentation with Data
… for more details and registration information. Sign up for our newsletter , the JGI Primer, to stay informed … The JGI and EMSL are U.S. Department of Energy (DOE) Office of Science national scientific user facilities … tools at no cost. The JGI and EMSL are supported by the DOE's Biological and Environmental Research (BER) program.   …
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Hybrid error correction and de novo assembly of single-molecule sequencing reads
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Genome sequencing of four Aureobasidium pullulans varieties: biotechnological potential, stress tolerance, and description of new species
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Understanding Wildfire Recovery, Starting in Soil
… a step further, using both DNA and messenger RNA (mRNA) sequencing to identify those traits that have helped fungi, … Sciences Laboratory and the U.S. Department of Energy (DOE) Joint Genome Institute (JGI). EMSL and the JGI are DOE … for User Science (FICUS) initiative and used resources at the Environmental Molecular Sciences Laboratory …
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Identifying the Microbial Cleanup Crew at a Superfund Site
… down PCE into the chemical compound ethene. Applying genome sequencing and analysis, the researchers identified other … areas that require cleanup and long-term monitoring. The DOE has been similarly invested in environmental management, … populations rely heavily on groundwater as their only source of clean drinking water. Over 90% of the PCE in the …
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JGI Early Career Researchers Featured in mSystems Special Issue
… (FACS) to sort cells into several small pools before sequencing to recover rare microbes. The technique was … Berkeley National Laboratory (Berkeley Lab). JGI is a DOE Office of Science user facility at Berkeley Lab.   … … working to address some of the most pressing challenges of our time. For more information, please visit  …
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Tracking the Origins of Methane-Producing Microbes
Chan Zuckerberg Biohub, and the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science … These two things combined led us to conclude that our new methanogen did not belong to the Euryarchaeota, the … and cleanup. The JGI provides integrated high-throughput sequencing and computational analysis that enable …
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Celebrating a Decade of Science through the JGI-UC Merced Genomics Internship Program
… inception of the flagship internship program between the DOE Joint Genome Institute (JGI) and University of … of sorts at the Lab. “This project represents part of our long term efforts to contribute towards a diverse … and scientific community (working with the JGI) as well as our efforts in workforce development. We have a number of …
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