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Single-cell genomics reveals features of a Colwellia species that was dominant during the Deepwater Horizon oil spill
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Operating Expenses
FY2023 Spending Profile The JGI is funded primarily by the DOE Office of Biological and …
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Genome Insider
Genome Insider is a podcast that showcases the work of JGI collaborators in brief forays, connecting audiences with … research to better understand — and harness — the superpowers encoded in plants, fungi, microalgae, … to contribute to a more sustainable world. Learn about JGI-supported projects, delving into the researchers’ …
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VEGA Symposium
Hosted by the JGI and co-organized with NIST,  the goal of the Viral … Libusha Kelly , Albert Einstein College of Medicine JGI Organizers Simon Roux, Jonelle Basso, Maureen Berg, …
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Building Sphagnum Genomic Resources
… carbon cycling impact.   The Science Enabled by the JGI’s Community Science Program (CSP), researchers are developing a number of resources to build up Sphagnum as a plant model system focused on carbon … grant 15510). … Sphagnum fallax on Phytozome … Datasets …
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NeLLi — Symposium on New Lineages of Life
…   Laura Hug , University of Waterloo Fabien Burki , Uppsala University Rebecca Batstone , McMaster University … Coordination Rekha Seshadri,  Functional Annotation Group Natalia Ivanova, Functional Annotation Lead Juan Villada, … Hatzenpichler, Montana State University Maggie Sogin, UC Merced   …
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The Expanding Universe of Methane Metabolisms in Archaea
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, for publicly … IMG because the database already contains metagenome datasets from a variety of environments, as well as tools for … Archaea and Eukarya.   One genome, two metabolic pathways “Up to this point, most phylogenomic trees have relied on …
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … the team focused on Actinobacteria ( Actinomycetota ), a group of bacteria with diverse metabolic activities. Found in … Natalia Ivanova, senior author of the study and head of the JGI’s Microbiome Annotation Group. Many of these bacterial …
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Expanding Virophage Diversity
… the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science facility, have increased the … mining more than 14,000 publicly available metagenomic datasets in JGI’s  Integrated Microbial Genomes & Microbiomes … Kb. Additionally, the gene counts have similarly gone up from 13-25 to 12-39. “Overall,” the team concluded, “we …
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Year in Review: JGI’s 2018 Progress Report Available Now
The latest edition of the JGI Progress Report highlights notable research and … lake east of California’s Yosemite National Park, taken by JGI’s own Jon Bertsch. Microbes isolated from Mono Lake were sequenced by the JGI (isolates here , here and here ), and the data has been …
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User Support Analysis Group
The User Support Analysis group provides computational analysis for new technology development and JGI user science projects. We perform analysis for diverse …
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Extracting the Secrets of Secondary Metabolites
… produced in response to hardship or competition. They make up the foundation for a slew of vital products in … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … CRISPR to knock out or activate genes, researchers at the JGI were able to monitor loss- and gain-of-function. The …
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