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A Community Resource for Secondary Metabolite Researchers
… The U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … from isolate and metagenome data.   The SMC ( smc.jgi.doe.gov ) is designed with two main objectives. First … on solutions.  Compared with past efforts at the JGI, like IMG-ABC, and other academic efforts, SMC is …
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New Vision, New Mission, New Plan: The JGI’s Next Five Years
… New 5-year strategic plan outlines how the JGI will advance the bioeconomy, leveraging partnerships to … The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) has released its newest 5-Year Strategic Plan: … requires a deep understanding of biological systems. The JGI strategic plan lays out how users and the global …
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New Research Finds Flagella in the Terrestrial Roots of Marine Bacteria
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The Power of One, Amplified
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … was performed by Danielle Goudeau and Rex Malmstrom of the JGI’s Microscale Applications group . Cells were randomly … amplified, then sequenced and assembled. Robert Bowers , a JGI scientist within the Microbial Program, led the genomic …
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CSP Functional Genomics
… function.  The emphasis is on projects leveraging JGI’s Biodesign and ‘omics capabilities to enhance … without the capabilities and expertise available at the JGI. Proposals to this call may be submitted to the JGI at any time using a simple web-based form and are …
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JGI-Enabled Research Demonstrates the Existence of New Methane-Makers
… levels of methane, a potent greenhouse gas, regulate Earth’s climate. Most methane is produced in environments … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … by methanogenesis. Both studies were recently published in  Nature .  Researchers started by collecting samples from …
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Climate Change Threatens Base of Polar Oceans’ Bountiful Food Webs
… polar oceans give rise to some of the largest food webs on Earth. And at their base are microscopic, photosynthetic … according to a new study published September 16, 2021 in Nature Communications , warmer waters and communities … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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For the Tiniest Archaea, A Genomic Switch of Friend or Foe
… they likely help their hosts. The Impact Meters below the Earth’s surface, within the crust, there is a vast ecosystem … all operate in concert to form the foundation of this deep Earth ecosystem. For example, when certain viruses attack, … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Informatics Advisory Committee
… The IAC is chartered by the JGI Chief Informatics Officer (CIO) and reports to the JGI Director. The IAC is chartered to render advice, … the effective management and strategic objectives for the JGI’s data science, informatics and information technology …
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Nikos Kyrpides
… the functional dark matter through global metagenomics. Nature . 622(7983):594-602. Camargo AP. et al. (2023) … Nayfach S, et al. (2021) A genomic catalog of Earth’s microbiomes. Nature Biotechnol . 39(4):499-509 Danko … . 39:578-585 Nayfach S. et al. 2021. A genomic catalog of Earth’s microbiomes. Nature Biotechnol . 39:499-509. …
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Tanja Woyke
… of User Program position in 2021. In addition to her JGI appointment, she also holds an Adjunct Scientist … provides direction, leadership and oversight for all of the JGI user programs, including the Community Science Program … Reviewer for major journals and funding agencies, including Nature, Nature Biotechnology, Nature Methods, Nature …
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CSP New Investigator Call
… is for investigators and research initiatives new to the JGI. Projects must be independent of ongoing JGI proposals, and lead PIs cannot have been lead PI on any previously accepted JGI CSP or FICUS proposal.   Competitive projects will … Proposers are encouraged to review the JGI’s sample requirements . Samples that are not available …
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