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Understanding Wildfire Recovery, Starting in Soil
… A metagenomic look at the soil microbes present a year after a wildfire. The … and growth.  This study builds on the pyrophilous fungi the JGI has previously sequenced , and provides a powerful … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI). EMSL and the JGI are DOE Office of Science User …
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Disclaimer
… NOTICE Information from this server resides on a computer system funded … documents available from this server, neither the United States Government nor the University of California nor any of … for the accuracy, completeness, or usefulness of any information, apparatus, product, or process disclosed, or …
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Does time matter? Intraspecific diversity of ribosomal RNA genes in lineages of the allopolyploid model grass Brachypodium hybridum with different evolutionary ages
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Partnerships: Myco-Ed
… The Mycological Curriculum for Education and Discovery  (Myco-Ed) is a Course-Based Undergraduate Research Experience (CURE) that consists of coordinated hands-on experiments across … DNA is extracted from samples, which is then sent to the JGI for genome sequencing, assembly and annotation. …
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Eelgrass Proves to Be Much Younger Than We Thought
… one of the most abundant plants in the ocean, originated in Japan before spreading around the globe. Now, … its history. Their research, published in  August 2023 in  Nature Plants , was able to assess absolute time estimates for major colonization events. It was previously …
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A Collaboration to Improve Plant Genome Annotations Across Species
… specializes in genome improvement for plants. As part of that partnership, the JGI and HudsonAlpha researchers led a team that  recently … a subscriber? Avinash: It has been publicly available since 2018. There were more than 15 citations even before this was …
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
… Across four forests, researchers have leveraged data from the 1000 Fungal Genomes project to form new … The U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … mapping these RNA reads. “Currently, this is the largest JGI-sequenced fungal metatranscriptome yet,” said Igor …
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Improving the Cacao Genome and Phytozome
… Global chocolate brands can’t exist without cocoa According to the  … Organization (ICCO), global cocoa bean production in 2017-2018  was 4.6 million metric tons . The global chocolate … for comparative purposes on the latest version of the JGI plant portal Phytozome at  phytozome-next.JGI.doe.gov . …
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Polar Phytoplankton Need Zinc to Cope with the Cold
… some of their most important functions. Even in the chilly waters of Antarctica, tiny ocean-dwellers called … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … Berkeley National Laboratory (Berkeley Lab) through the JGI Community Science Program (CSP) .  Through this …
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Cold adaptive traits revealed by comparative genomic analysis of the eurypsychrophile Rhodococcus sp. JG3 isolated from high elevation McMurdo Dry Valley permafrost, Antarctica
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Building Sphagnum Genomic Resources
… Sphagnome data would enable researchers’ insights on their potential … carbon cycling impact.   The Science Enabled by the JGI’s Community Science Program (CSP), researchers are … draft genome for  S. fallax is already available on the  JGI plant portal Phytozome , and the S. magellanicum genome …
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Meeting Code of Conduct
… All participants and staff of JGI events are required to adhere to the following Code of … event is to build a stronger community. Our goal is to create an environment where everyone feels welcome to participate, speak up, ask questions, and engage in conversation. …
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