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Computationally Classifying Fungal Lifestyles
Machine learning methods were applied on sequenced fungal … known to infect most major food crops and feedstocks for biomass and biofuel production. Learning about the … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Building Sphagnum Genomic Resources
Sphagnome data would enable researchers’ insights on their potential carbon cycling impact.   The Science Enabled … model system focused on carbon cycling studies, rather than for food or fuel applications. The Impact Sphagnum’s impact …
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The More the Merrier: Making the Case for Plant Pan-genomes
Brachypodium model system traces polyploid genome evolution. … by the concept, “the more the merrier,” with respect to their genomes. In their base state, they are diploids with … Laboratory (Berkeley Lab), relied on a model grass system for answers. Their work  recently appeared in  Nature …
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Tracing the Evolution of Shiitake Mushrooms
… the diversity of white rot fungi in the genus Lentinula   The Science Shiitake mushrooms get their name from the same place they often source their … 60 existing sequences, this work expands the family tree for Lentinula. Within those samples, this study also tracks …
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Operating Expenses
FY2023 Spending Profile The JGI is funded primarily by the DOE Office of Biological and Environmental Research (BER), a program within the …
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Tanja Woyke
After studying the mechanism of action of antifungal natural products and their derivatives during her Ph.D. in Microbiology at the … was the symbiont community of a gutless oligochaete for which she deciphered function and host-symbiont …
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From Intern to Published Scientist: The Journey of a JGI-UC Merced Intern
For many scientists, the culmination of their work into a written report that is published in a … Rhondene Wint, an alumna of the DOE Joint Genome Institute (JGI)-UC Merced internship program and current PhD student, …
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Genome Insider
Genome Insider is a podcast that showcases the work of JGI collaborators in brief forays, connecting audiences with the people behind the science. Hear diverse voices in science talk about their groundbreaking research to better understand — and …
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VEGA Symposium
Hosted by the JGI and co-organized with NIST,  the goal of the Viral EcoGenomics & … to all of our in-person and virtual attendees! Click here for the event photos. Keynote Speakers Katrine Whiteson , UC …
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Frederik Schulz
Schulz joined the DOE Joint Genome Institute in 2016 and is leading the New Lineages of Life Group. His research … and biogeochemical cycles. He provides his expertise to the JGI user community and supports various user projects in the … discovery pipeline and enrichment metagenomics for terrestrial protists. These approaches enable novel …
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Year in Review: JGI’s 2018 Progress Report Available Now
The latest edition of the JGI Progress Report highlights notable … is an image of Mono Lake, a saline soda lake east of California’s Yosemite National Park, taken by JGI’s own Jon … better understand arsenic mobility and to better understand their roles in the global sulfur cycle. Copies are available …
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Alabama Agricultural & Mechanical University Internship Program
… 2024 was a year of first, including the flagship internship … Institute. AAMU students spent two months in Berkeley, California honing their scientific skills and collaborating with their mentors …
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