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CreA-mediated repression of gene expression occurs at low monosaccharide levels during fungal plant biomass conversion in a time and substrate dependent manner
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Plastome evolution in annual Brachypodium species reveals widespread heteroplasmy and chloroplast capture, lineage-specific codon usage bias, and low positive selection
Learn more
An Integrated Dataset to Understand Ecosystem Interaction
… Research yields a comprehensive tree and soil dataset for understanding the dynamic relationship … microbial partners. The Science To help better understand how ecosystems work and how healthy they are, a recent data set  outlined in  … U.S. Department of Energy, Office of Science, Biological and Environmental Research. Oak Ridge National Laboratory is …
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Gotta Catch 'Em Gall
… Kasey Markel and Patrick Shih (UC Berkeley and the Joint BioEnergy … galls.  In this episode, hear from Kasey and Patrick about how this project unfolded, and how they worked with the JGI's metabolomics program to find …
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The Expanding Universe of Methane Metabolisms in Archaea
… archaeal genomes provide new insights into an ancient metabolism. Methane is a greenhouse gas 20 times … “Therefore, determining under which form it emerged and how it gave rise to the different pathways we see today is … Borrel and Gribaldo said. “Overall, these results show a striking case of how metabolic diversity can emerge …
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Boosting Small Molecule Production in Super “Soup”
… have both the machinery to make products such as proteins, and the mechanisms for maintenance to keep processes running … the small molecules glycerol and itaconic acid to see how the cell-free system allowed them to increase the … in the absence of cell walls. If we can continue to learn how to focus the carbon flux, we can avoid transport …
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Annual Genomics of Energy & Environment Meeting
… Thank you for joining us at the 2024 DOE Joint Genome … gathering of leaders from diverse disciplines to highlight how they are addressing the world’s most pressing energy and environmental challenges.  The invited talks emphasize how the research infrastructure – DNA sequencing, synthesis, …
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An Earth Month Look at Sustainability Efforts at the JGI
… Sustainable Garden Club, hosted a DIY Succulent Workshop and Plant Sale. All year, the JGI helps support finding … experience, Ciobanu said. “If you want to learn both how to propagate and how to grow plants that are sustainable in many … Lawrence Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean …
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JGI Workshops at PAG
… Jan. 12 workshop: The Rapidly Expanding Genomics of Algae   … to BER funded activities of plant systems. We will describe how to apply for a project with the JGI Community Science Program and how you can use the KBase system to accelerate your plant …
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VEGA Symposium
… the DOE Joint Genome Institute, the 5th Viral EcoGenomics and Applications (VEGA) symposium will take place November 18-19, 2026 on the UC Berkeley campus. Organized every two years since 2018, the goal of this … a “Viral Ecogenomics” community to foster discussion on how to best capture and characterize uncultivated viral …
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From Intern to Published Scientist: The Journey of a JGI-UC Merced Intern
… For many scientists, the culmination of their work into a written … machine learning tools. “This was very exciting to see how Rhondene not only embraced the research question and … perspective about what it means to be a scientist. “To see how team science is done at an advanced and large research …
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Data Discovery Tool Helps Identify Microbial Roles within Metagenomes
… Protein annotations provide insights into environmental tendencies … being used and cycled in different environments. It also shows how environmental conditions may affect metabolic activity …
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